Gene Mkms_1979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_1979 
Symbol 
ID4613727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand+ 
Start bp2097585 
End bp2098268 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content71% 
IMG OID639791645 
Producturacil-DNA glycosylase 
Protein accessionYP_937968 
Protein GI119868016 
COG category[L] Replication, recombination and repair 
COG ID[COG0692] Uracil DNA glycosylase 
TIGRFAM ID[TIGR00628] uracil-DNA glycosylase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.68386 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTGCAC GTGCGCTCTC CGAACTCGTC GACCAGGGCT GGGCGCAGGC GCTCGAACCC 
GTGCGTGAGC AGGTGGCCCA GATGGGGGAG TTCCTGCGGG CCGAACTCGC CGCCGGTCAC 
CGCTACCTGC CCGCGGGCGC GAACGTGCTG CGGGCCTTCT CGTTTCCGTT CGACCAGGTC 
CGCGTGCTGA TCGTGGGTCA GGATCCGTAT CCGACGCCCG GGCACGCCGT CGGCCTGAGC 
TTCTCGGTGG ATCCGGAGGT CCGACCGCTG CCGCGCAGCC TGGCTAACAT CTTCACCGAG 
TACACCGCCG ACCTCGGCTA CCCGCAACCG AGCAACGGCG ACCTCAGTCC GTGGGCGCAG 
CGCGGTGTGC TGCTGCTCAA CAGGGTGCTG ACGGTGCGCC CCGGCACCCC CGCGTCACAC 
CGCGGCAAGG GCTGGGAGGC GGTGACCGAA TGCGCGATCC GGGCGCTCGT CGCCAGGGAC 
ACCCCGATGG TGGCCGTGCT GTGGGGCCGC GACGCCGCGA CCCTCAAACC GATGCTGACG 
GGCAGCGCGT GCGTGGCGAT CGAGTCACCG CACCCGTCGC CGCTGTCGGC GTCGCGCGGG 
TTCTTCGGGT CGCGTCCGTT CAGCCGGGCC AATGAGTTGC TGACCCAGAT GGGCGCCGAA 
CCGATCGACT GGCGGCTGCC CTGA
 
Protein sequence
MTARALSELV DQGWAQALEP VREQVAQMGE FLRAELAAGH RYLPAGANVL RAFSFPFDQV 
RVLIVGQDPY PTPGHAVGLS FSVDPEVRPL PRSLANIFTE YTADLGYPQP SNGDLSPWAQ 
RGVLLLNRVL TVRPGTPASH RGKGWEAVTE CAIRALVARD TPMVAVLWGR DAATLKPMLT 
GSACVAIESP HPSPLSASRG FFGSRPFSRA NELLTQMGAE PIDWRLP