Gene Mkms_1891 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_1891 
Symbol 
ID4613818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp2006734 
End bp2007600 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content71% 
IMG OID639791556 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_937881 
Protein GI119867929 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.544788 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGTCG CGCTGCCGGC ACCGGCCATG GTGCGCACCC GGCGGCGGGG GCTGACGCTG 
CCGCAGTCGC GGTCCGCGGT GGTGAACTGG ATCGGCTTCT CGCTCATCGG CATCGTCACC
CTGGTCGCGG TCGCGGTGCC GGTGCTCGCG CCCTACGATC CGCTGTTGCC GGTGGGCCTG
CCGCTGCAGG CGCCCGGCGT GGACGGATTC CTGCTCGGGA CCGACAGCAT CGGCCGCGAC
ATCTTGTCGC GCGTGCTCTA CGGCGCAAGG TCGAGCTGGT TCGCGGCGCT GGCCGTGGTG
GCCCTCGGGC TGTTCATCGG CGGTCTGGTC GGGCTCATCG CCGGGACGGC GGGCGGCTGG
ATCGACTCGG TGCTCATGAG GATCACCGAC GCCTTCCTGT CGCTGCCCGC GCCGGTGCTG
GCGATCGCGG TGGTCGCCGC GCTCGGCCCG GGGTTCCTGC ACACGCTCAT TGCGGTGTCG
ATCGTGTGGT GGCCGTTCTA CGCGCGGCTG GTCCGCGGTG AGATCACCCG GCTCGCCGCC
AGACCGCACG TCGAGGCGGC CAAACTCGCC GGCGTGGGGC CGCTTCGGCT GGCGCGTCGT
CACCTGCTGC CCGGTGCGGT GCCCAACGCG GTCGTCGCGG CCAGCCTGGA CATCGGCACC
CTGATCCTCA CCCTGGCCGC ACTGTCGTTC CTGGGCCTCG GTCAGTCCGC GCCCGCACCC
GAGCTCGGCG CCGACTCGGC ACGCAACCTG AGCTACTTCC TGCAGCAGTG GTGGATACCC
GTGATGCCCG GACTCGGGGT CCTGGTACTC GCGTTGGTCG GCAACGTCGC CGGGGACAGC
CTGCGCAACC TGATGAAGAC GAAATAA
 
Protein sequence
MAVALPAPAM VRTRRRGLTL PQSRSAVVNW IGFSLIGIVT LVAVAVPVLA PYDPLLPVGL 
PLQAPGVDGF LLGTDSIGRD ILSRVLYGAR SSWFAALAVV ALGLFIGGLV GLIAGTAGGW
IDSVLMRITD AFLSLPAPVL AIAVVAALGP GFLHTLIAVS IVWWPFYARL VRGEITRLAA
RPHVEAAKLA GVGPLRLARR HLLPGAVPNA VVAASLDIGT LILTLAALSF LGLGQSAPAP
ELGADSARNL SYFLQQWWIP VMPGLGVLVL ALVGNVAGDS LRNLMKTK