Gene Mkms_1827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_1827 
Symbol 
ID4613754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp1938805 
End bp1940019 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content67% 
IMG OID639791493 
ProductL-carnitine dehydratase/bile acid-inducible protein F 
Protein accessionYP_937818 
Protein GI119867866 
COG category[C] Energy production and conversion 
COG ID[COG1804] Predicted acyl-CoA transferases/carnitine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.86666 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGGGCG TGCGGGTCCT CGAGGTCGCA CAGTTCACCT TCGTGCCGGC GGCGGGTGCC 
ATCCTCGCCG ACTGGGGTGC CGACGTCATC AAGGTCGAAC ACCCCGTGCG CGGTGACACT
CAACGCGGTT TCATCAACAT GGGCGGATTC CAACTGGATC CGAACCGGCA TCCGCTCATC
GAGCACCCCA ACCGCGGTAA GCGCAGCGTC GGTATCGACG TGTCGACACC CGACGGCCAG
GAGGTGCTCT ACGAGATCGC CAAGACCGCG GACGTGTTCC TGACCAACTA CCTGCCCGCA
CAGCGGCAGA AGAACAAGTT CGACGTCGAA CACATCCGGG CGGCGAACCC GAACATCATC
TACGCCCGCG GCAGCGCCTA CGGCGACAAG GGTCCCGAAC GTGACGTGGG CGGTTTCGAC
GGCACCGCGT TCTGGACGCG CAGCGGGGTG GGTCATGCAC TGACCCCCGA GGAGATCGGC
GGCGCGCTGT CGCAGGGCAT CCCGGCCTTC GGCGATTCGA TCGGCGGGAT GAACATCGCC
GGCGGGATCT CGGCGGCACT GTTCCACCGC GAGCGCACCG GCGAAGCGGT CGAACTCGAC
GTGTCCCTGC TCAGCACCGC CTGGTGGGCG GCCGGCGCCA GCGTCACGCA GGGCATGGAG
ACCGGTGAGA CGATGCGCTC ACTGATGCCC GACTCGGCGA GCCCCTCGGT CAACCCGTTC
CTGGGCAACT ACCTGACCTC CGACGGCGGC ACGATCAACC TGTGCATCGT CAGTCCGACC
GGGTACATCC GCGACGCCTT CGAACACCTC GGCCTGCCCG AACTGGCCGA CGACCCGCGC
TTCAACGATG TCATGCCGCT CATCGAGAAT GCCCCGGCCG CAGTGCAATT GATCGCCGAC
GCGATCCGCA GCAAACCGTT CGACTACTGG CGCCTGCACC TGAAGACGAT GAAGGGCCAG
TGGGCGCCGT TCCAGAGCCT GGTCGATCTG GGCACCGACG AGCAGGCCAT CGCCAACGAC
ATGATCGTCG AGGTCGAGGC CAACGACGGC GGCGAACCGT TCAAGGTGGT GCGCGGCCCG
GTGCAGTTCA ACCACGAACC GCTGGTGACG ACCCGCGCCC CGCAGGCCTC CGAACACACC
GAGATCGTGC TCATGGAGTT GGGTCTGGAC TGGGACCGCA TCGAGGCGCT CAAGGACTCG
GGCGCCATCG CCTGA
 
Protein sequence
MEGVRVLEVA QFTFVPAAGA ILADWGADVI KVEHPVRGDT QRGFINMGGF QLDPNRHPLI 
EHPNRGKRSV GIDVSTPDGQ EVLYEIAKTA DVFLTNYLPA QRQKNKFDVE HIRAANPNII
YARGSAYGDK GPERDVGGFD GTAFWTRSGV GHALTPEEIG GALSQGIPAF GDSIGGMNIA
GGISAALFHR ERTGEAVELD VSLLSTAWWA AGASVTQGME TGETMRSLMP DSASPSVNPF
LGNYLTSDGG TINLCIVSPT GYIRDAFEHL GLPELADDPR FNDVMPLIEN APAAVQLIAD
AIRSKPFDYW RLHLKTMKGQ WAPFQSLVDL GTDEQAIAND MIVEVEANDG GEPFKVVRGP
VQFNHEPLVT TRAPQASEHT EIVLMELGLD WDRIEALKDS GAIA