| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mkms_1516 |
|---|
| Symbol | |
|---|
| ID | 4614167 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. KMS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008705 |
|---|
| Strand | + |
|---|
| Start bp | 1629579 |
|---|
| End bp | 1631216 |
|---|
| Gene Length | 1638 bp |
|---|
| Protein Length | 545 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639791190 |
|---|
| Product | peptide chain release factor 3 |
|---|
| Protein accession | YP_937516 |
|---|
| Protein GI | 119867564 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG4108] Peptide chain release factor RF-3 |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00503] peptide chain release factor 3 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGATA CCGCCTCAGG TGTGTCGACG GCCACCGAGT CGCGGCCAGA CCGAGTTTCC
GCCGAAGCGC AACGTCGCAG GACGTTCGCT GTGATCAGCC ACCCCGACGC CGGCAAGTCC
ACCTTGACCG AGGCGCTGGT GCTGCACGCC AAGGCGATCA CCGAGGCCGG CGCCATCCAC
GGTAAGGCGG GCCGCCGCGC CACGGTGTCT GACTGGATGG AGATGGAGAA GGCCCGCGGC
ATCTCCATCA CCTCGACGGC GCTGCAGTTC CCTTACCGCA CCCAGGCGGG CGACACCTGC
ATCATCAACC TGCTCGACAC CCCGGGGCAC GCCGACTTCT CCGAAGACAC CTACCGGGTG
CTGACCGCCG TCGATTGCGC CGTGATGCTC ATCGACGCCG CGAAAGGTCT CGAACCGCAG
ACGCTGAAGC TCTTCCAGGT CTGCCGCCAC CGCGGGATCC CCATCATCAC GGTGGTCAAC
AAGTGGGACC GGCCGGGCCG TCACGCCCTG GAATTGATGG ATGAGATCCA CGACCGCATT
CAACTGCAGA CGACGCCGCT GACCTGGCCG GTCGGCATCG CCGGCGACTT CAAAGGAGTC
CTCGACCGGC GCAGCGGCAC CTTCATCCGG TTCACCCGCA CCGCGGGCGG CGCCACCGCC
GCACCGGAGG AGCACATCGA TGCGTCCCAG GCCCACGAGG CCGCGGGTAC CGACTGGGAC
ACCGCGGTGG AAGAGTCCGA ACTGCTGAGT GCCGACGGCG CCGACTTCGA CCGCGACTCG
TTCCTCAGGT GCACCTCGAC ACCGGTCCTG TTCACGTCGG CGGTGCTCAA CTTCGGTGTC
AACCAATTGC TCGACGTGTT GGCCCAACTC GCACCGCCGC CACGCGGTCA GCTCGACATC
GACGGCAGTC GACGCGAAAC CACCGCGCCG TTCAGTGCGT TCGTGTTCAA GGTCCAGGCG
GGCATGGACT CCGCTCACCG GGACCGCATC GCCTACGCCC GGGTCGTTTC AGGCACCTTC
GAACGCGGAG ACGTCCTCAC CCACGCCACC ACCGGCAAGC CGTTCGTCAC CAAGTACGCG
CAATCGGTCT TCGGCCAGCA GCGGTCCACC CTGGACACGG CCTGGCCGGG GGATGTCATC
GGACTCGCCA ACGCCGCCGC GCTGCGACCG GGTGACACCC TGTACCGGGA TGTCCCGGTG
CAGTACCCGC CGATTCCGAG CTTCTCGCCC GAGCATTTCG CCGTCGCGCG GGGCACCGAC
CCCAGCAAGC ACAAGCAGTT CCGTAAAGGG ATCGAGCAGC TGGACCAGGA GGGCGTCATC
CAGGTGCTGC GTTCGGACCG GCGAGGTGAT CAGGCGCCGG TGTTCGCCGC GGTGGGTCCG
ATGCAGTTCG AGGTCGCCAC TCATCGGATG GCCGGCGAGT TCAACGCGCC GATCGCGCTC
GAGCCGCTTC CGTACACGGT GGCCCGCGTC GCCGACCCCG ATGACGTCGA GATCCTGCAG
AAGCAGGCCT CGGTCGAGGT CTTCACCCGC ACCGACGGAG TCGTCATCGC GGTGTTCTCG
AACAAATGGC GCCTCGAGAA CGTCGAGCGG GAACTTCCCG ACGTACGGCT GCGGTCACTG
GTGGCAGCAG CAGACTAG
|
|---|
| Protein sequence | MTDTASGVST ATESRPDRVS AEAQRRRTFA VISHPDAGKS TLTEALVLHA KAITEAGAIH
GKAGRRATVS DWMEMEKARG ISITSTALQF PYRTQAGDTC IINLLDTPGH ADFSEDTYRV
LTAVDCAVML IDAAKGLEPQ TLKLFQVCRH RGIPIITVVN KWDRPGRHAL ELMDEIHDRI
QLQTTPLTWP VGIAGDFKGV LDRRSGTFIR FTRTAGGATA APEEHIDASQ AHEAAGTDWD
TAVEESELLS ADGADFDRDS FLRCTSTPVL FTSAVLNFGV NQLLDVLAQL APPPRGQLDI
DGSRRETTAP FSAFVFKVQA GMDSAHRDRI AYARVVSGTF ERGDVLTHAT TGKPFVTKYA
QSVFGQQRST LDTAWPGDVI GLANAAALRP GDTLYRDVPV QYPPIPSFSP EHFAVARGTD
PSKHKQFRKG IEQLDQEGVI QVLRSDRRGD QAPVFAAVGP MQFEVATHRM AGEFNAPIAL
EPLPYTVARV ADPDDVEILQ KQASVEVFTR TDGVVIAVFS NKWRLENVER ELPDVRLRSL
VAAAD
|
|---|
| |