| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mkms_1484 |
|---|
| Symbol | |
|---|
| ID | 4614135 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. KMS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008705 |
|---|
| Strand | + |
|---|
| Start bp | 1596254 |
|---|
| End bp | 1597093 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639791159 |
|---|
| Product | integrase catalytic subunit |
|---|
| Protein accession | YP_937485 |
|---|
| Protein GI | 119867533 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2801] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0324114 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCCCCGA GCACCTACTA CGACGCCAAA ACCCGCCCAC CGTCGGCGCG GGCACAGCGC
GATGCAGTCC TGGGGCCGGC GTTGCGCCAG CTCTGGAAGG ACAACTACTG CGTCTATGGG
GCTCACAAGC TGTGGAAAAC CGCCCGCCGG GCTGGCTATG ACGTCGGCCG CGACCAGGTG
GCCCGACTGA TGCGGGCCGC CGGAATCCAG GGGGTACGGC GCGGCAAACG TGTCCGCACC
ACCAAACCTG ACCCGGTAGC AGCGCGGCAC CCGGACCTGG TGAAGCGCAA GTTCACCGCG
ACGGCCCCGA ACCAGCTCTG GGTGACCGAC CTGACGTTCG TGCCGACATG GGCCGGGGTG
GCCTATGTGT GCTTCATCGT CGATGCGCAC TCGCGGATGA TCGTGGGGTG GCGGGTAGCG
TCGCATATGC GCACTTCCAT GGTGCTAGAC GCGTTGGAGA TGGCACGCTG GTCACGCGGA
ACTACATTGC AGAACTTGAT ATGTCACTCC GATGCCGGGT CGCAATTCAC CTCGATTCGC
TACGGAGAGC GCCTCGCTGA GATCGGCGGC GTCCCATCCA TCGGCACCGT CGGGGACAGC
TTCGATAACG CCCTCGCCGA GACGGTCAAC GGATACTACA AAGCCGAGCT GATCTACGGG
CCGGCCCGCA GCGGGCCGTG GAAGACCGTC GAAGACGTCG AACTTGCCAC CCTCAGCTGG
GTCTACTGGC ACAACACCAG CCGCCTGCAC AGCTACCTTG GCGACCTCCC GCCGGCCGAG
TTCGAAGCGG CGTTCTACGA TGCATCCCGG AGCGGCCAAC CCCTGGTCGA AATCCAATAG
|
|---|
| Protein sequence | MAPSTYYDAK TRPPSARAQR DAVLGPALRQ LWKDNYCVYG AHKLWKTARR AGYDVGRDQV
ARLMRAAGIQ GVRRGKRVRT TKPDPVAARH PDLVKRKFTA TAPNQLWVTD LTFVPTWAGV
AYVCFIVDAH SRMIVGWRVA SHMRTSMVLD ALEMARWSRG TTLQNLICHS DAGSQFTSIR
YGERLAEIGG VPSIGTVGDS FDNALAETVN GYYKAELIYG PARSGPWKTV EDVELATLSW
VYWHNTSRLH SYLGDLPPAE FEAAFYDASR SGQPLVEIQ
|
|---|
| |