Gene Mkms_1420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_1420 
Symbol 
ID4614251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp1519241 
End bp1520080 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content70% 
IMG OID639791095 
Productalpha/beta hydrolase fold 
Protein accessionYP_937422 
Protein GI119867470 
COG category[I] Lipid transport and metabolism 
COG ID[COG2267] Lysophospholipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.302874 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATCAC GGGGGTCCGA CAAGCCGCCG TCGGTGCGGG CTGGCACCAT CGTGGACGTG 
AGCCTGCACG TGCATCGCTA CGGTCCGCCG GAACCCGCCC AGCTGCTGGC TGTGCACGGG
TTGACCGGCC ACGGTCAGCG CTGGCAGACG CTGGCAACCC GGTATCTGCC CGAGTTCTCC
GTCGCCGCAC CGGACTTGAT CGGTCACGGC AGATCCTCGT GGGCGGCCCC GTGGACGTTG
GACGCCAACA CCGACGCGCT CGCCAGCCTG CTCGACGCCG ACGGGGGCGG TCCGGTCGTG
GTGGTGGGAC ACTCCTTCGG TGGTGCGGTC GCGCTGGCCC TGGCGGCGGC GCGGCCGGAT
CTCGTGTCGG GTCTGGTGCT GCTCGACCCG GCGGTCGGCC TCGACGGTGA GTGGATGCGC
GAGATCGCCG ACGACATGTT CGCCTCCCCC GACTACACCG ACCGGGCCGA GGCGCGGGCC
GAGAAGGTGT CGGGGTCATG GGGTGAGGTG GATTCCGCCG AACTGGACCG CGAACTCGAC
GAGCATCTGG TCACCCTGCC GAACGGCCGC AGCGGGTGGC GGATCAGCAT TCCGGCGATG
ATGTCGTACT GGAGTGAGCT GGCCCGGCCG GTGACGGTCC CCCGAGACGG TACGCCGACC
ACCCTGGTGC GGGCGTCGCG CACCGACCCG CCGTACGCGA CCGACGAGCT GCTCGCGACG
CTCGACGCCG CCCTCGGATC GGATCTTACT GTGCTGCAGT GGGATTGCGA CCACATGGTG
GGTCAGGCGA AACCGGCGGA GACGGCTGCG GTCATCCGCG AACACCTCGA ACGGCACTGA
 
Protein sequence
MRSRGSDKPP SVRAGTIVDV SLHVHRYGPP EPAQLLAVHG LTGHGQRWQT LATRYLPEFS 
VAAPDLIGHG RSSWAAPWTL DANTDALASL LDADGGGPVV VVGHSFGGAV ALALAAARPD
LVSGLVLLDP AVGLDGEWMR EIADDMFASP DYTDRAEARA EKVSGSWGEV DSAELDRELD
EHLVTLPNGR SGWRISIPAM MSYWSELARP VTVPRDGTPT TLVRASRTDP PYATDELLAT
LDAALGSDLT VLQWDCDHMV GQAKPAETAA VIREHLERH