Gene Mkms_1397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_1397 
Symbol 
ID4614228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp1499852 
End bp1500565 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content66% 
IMG OID639791072 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_937399 
Protein GI119867447 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02947] RNA polymerase sigma-70 factor, TIGR02947 family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0562007 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCAACGG CCTGCCTGGA TCGTCCGGTG GATCTGCCGG GCCTGTTCGA CGGCGCCGCG 
ACAGAAGGGA CGGTGTCGAC CACGATGACC GACATCGACG GTGCGGCGGC CGAACGACAG
GAAACCGACG CCGAACTGAC CGCGCGTTTC GAGCGCGATG CGATACCGCT GCTCGACCAG
CTCTACGGCG GCGCGCTGCG CATGACGCGC AATCCCGCCG ACGCCGAGGA TCTGCTGCAG
GAGACGATGG TCAAGGCCTA TGCCGGGTTC CGGTCGTTCC GCGAGGGCAC CAACCTCAAG
GCGTGGCTAT ACCGCATCCT GACCAACACC TACATCAACA GCTACCGCAA GAAGCAGCGC
CAGCCGTCGG AGTACCCCAC CGAGGAGATC ACGGACTGGC AGCTCGCCGC GAACGCCGAG
CATTCGTCGA CGGGGCTGCG GTCTGCCGAG GTCGAGGCGC TCGAATCGCT GCCCGACACG
GAGATCAAGG CGGCGTTGCA GGCGCTGCCG GAGGATTTCC GGATGGCGGT GTACTACGCC
GACGTCGAAG GATTCCCGTA CAAGGAGATC GCGGAGATCA TGGATACGCC CATCGGGACC
GTGATGTCCC GGTTGCATCG TGGCCGCAAG CAGCTCCGTG AGCTGCTCGC CGATGTCGCC
CGAGACCGCG GGTTCCTCCG CGGTGCGCAA GCGCCCGAGG AGGTGTCGTC GTGA
 
Protein sequence
MPTACLDRPV DLPGLFDGAA TEGTVSTTMT DIDGAAAERQ ETDAELTARF ERDAIPLLDQ 
LYGGALRMTR NPADAEDLLQ ETMVKAYAGF RSFREGTNLK AWLYRILTNT YINSYRKKQR
QPSEYPTEEI TDWQLAANAE HSSTGLRSAE VEALESLPDT EIKAALQALP EDFRMAVYYA
DVEGFPYKEI AEIMDTPIGT VMSRLHRGRK QLRELLADVA RDRGFLRGAQ APEEVSS