| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mkms_0540 |
|---|
| Symbol | |
|---|
| ID | 4615084 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. KMS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008705 |
|---|
| Strand | - |
|---|
| Start bp | 591207 |
|---|
| End bp | 592070 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639790215 |
|---|
| Product | short chain dehydrogenase |
|---|
| Protein accession | YP_936546 |
|---|
| Protein GI | 119866594 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0506548 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATAACA TCAGGGGCAA GACCATCGCG ATCACCGGCG CCGCTCGCGG TATCGGTTAT
GCCACTGCGA AGGCTCTGCT CGCCCGCGGC GCCCGCGTCG TCATCGGCGA TCGCGACGTG
GCGCTGCAGG AGTCGGCGGT CGCCCAGTTG ACCAAGCTGG GCCCGGTGTC GGGCTACCCG
CTCGACGTCA CCGACCGTGA GTCGTTCGCG ACGTTCCTCG ACAAGGCGCG CACCGACGGC
GGCGGGCACA TCGACGTGTT GATCAACAAC GCCGGCGTCA TGCCGATCGG CCCGTTCCTC
GAACAGTCCG AACAGGCGAT CCGGTCGTCG ATCGAGGTCA ACCTCTACGG CGTGATCGCC
GGATGCCAGC TGGCGCTGCC CGACATGGTC GCTCGCGGGC GTGGTCACAT CATCAACATC
GCCTCGCTGT CCGGGGTGAT TCCCGTGCCC GGTCAGGTGG TCTACGTCGG CGCGAAGTTC
GGTGTGGTGG GCTTGTCGGC GGCGCTGGCC GACGAGGTGG CACCGCACGG CGTGCACGTG
TCGGTGGTGA TGCCGCCCTT CACCCGCACC GAGCTGATCT CGGGCACGAA GGAGTCCGGG
GCGATCAAAC CGGTCGAACC GGAGGACATC GCGGCGGCGA TCGTCAAGAC GCTGGACAAG
CCCAAGACGC ACGTGTCGGT ACCGCCGGCC CTGCGGTTCA CGGCCCAGGC GGCCCAGTTG
CTCGGACCGC GCGGGCGACG CTGGCTGAAC AAGAAGCTCG GTCTGGACAA CGTGTTCCTC
GACTTCGACA CCGCCAAGCG CAAGAGCTAC GAGGACCGCG CGCAGACGGC GCTCGGTGTG
GTCGAGTCCG GCGACAGGAC CTAG
|
|---|
| Protein sequence | MDNIRGKTIA ITGAARGIGY ATAKALLARG ARVVIGDRDV ALQESAVAQL TKLGPVSGYP
LDVTDRESFA TFLDKARTDG GGHIDVLINN AGVMPIGPFL EQSEQAIRSS IEVNLYGVIA
GCQLALPDMV ARGRGHIINI ASLSGVIPVP GQVVYVGAKF GVVGLSAALA DEVAPHGVHV
SVVMPPFTRT ELISGTKESG AIKPVEPEDI AAAIVKTLDK PKTHVSVPPA LRFTAQAAQL
LGPRGRRWLN KKLGLDNVFL DFDTAKRKSY EDRAQTALGV VESGDRT
|
|---|
| |