Gene Mjls_5346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_5346 
Symbol 
ID4881043 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp5598052 
End bp5598720 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content68% 
IMG OID640142660 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001073600 
Protein GI126437909 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1174] ABC-type proline/glycine betaine transport systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.766272 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGGTACC TGCTGACCCA CCTCGACGAC CTGTGGGCGC TCACGGTGAT CCACCTGCGG 
CTGTCGCTGA TCCCGATCGT GCTCGGGCTG CTGATCGCGG TGCCGCTCGG GGCGCTGGTG
CAGCGCACCA CCGCGCTGCG GCGGTTGACC ACCATCACCG CCAGCATCAT CTTCACGATC
CCGTCGCTCG CGTTGTTCGT GGTGCTGCCG CTGATCATCC CGACGCGCAT CCTCGACGAG
GCCAACGTGA TCGTGGCGCT GACGCTCTAC ACCGTCGCCC TGCTGGTGCG TGCCGTACCG
GAGGCGCTGG ACGCGGTGTC GCCCGCAGTG CTCGACGCGG CCACCGCCGT CGGCTACAAA
CCGCTCACCC GGATGCTGAA AATCGAACTG CCGCTTGCCG TTCCGGTACT CATCGCCAGC
CTGCGCGTCG TCGCGGTCAC CAATATCTCG ATGGTGTCGG TCGGCTCGGT CATCGGGGTC
GGCGGGCTCG GCACCTGGTT CACCGAGGGC TATCAGGCCA ACAAGAGCGA TCAGATCGTG
GCGGGCATCA TCGCGATCTT CGTGCTGGCG GTGGTGATCG ACACCCTGAT CATGCTGATC
GGCAAAGCCC TGACCCCCTG GGCCAGGGCC ACCCGCCCGG CCCGGCAGAA GGCGGGGGCG
GCCGCGTGA
 
Protein sequence
MRYLLTHLDD LWALTVIHLR LSLIPIVLGL LIAVPLGALV QRTTALRRLT TITASIIFTI 
PSLALFVVLP LIIPTRILDE ANVIVALTLY TVALLVRAVP EALDAVSPAV LDAATAVGYK
PLTRMLKIEL PLAVPVLIAS LRVVAVTNIS MVSVGSVIGV GGLGTWFTEG YQANKSDQIV
AGIIAIFVLA VVIDTLIMLI GKALTPWARA TRPARQKAGA AA