Gene Mjls_5265 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_5265 
Symbol 
ID4880962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp5515454 
End bp5516113 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content68% 
IMG OID640142576 
ProductXRE family transcriptional regulator 
Protein accessionYP_001073519 
Protein GI126437828 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.223709 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCCAT CCGAGGATTC TGCGCCGCTG CTGCGCAACA AGTCGGGCAC CGCGCGCGAG 
CGTGACCCGC AGGAACCGGT CGACGACACC GAGTTCGAGG CGGCGATCGG GCGCAACGTG
CGCCAACTGC GGCAGCAGCA CGGACTCACC GTCGCGGAGA TGGCCGAGCG CGTCGGCATC
TCCAAGGCCA TGATGAGCAA GATCGAGAAC GCGCAGACCT CCTGCAGCCT GTCCACGCTG
GCGCTGCTGG CCAAGGGGTT CGACGTACCG GTCACCACAC TGTTCCGCGG TGCGGACGTC
GAGCGCCCCG CCGCGTTCGT CAAGGCGGGT ACCGGCGCGC GGATCGTGCG CAACGGCACC
AAGGAGGGCC ACGACTACCA GTTGCTGGGC TCGCTGCGCG GTGAGCACAA GCGGCTGGAA
TGCCTCGAGG TCACGCTGTC GGAGAAGAGC CGGACCTACC CGCTGTTCCA GCATCCCGGC
ACCGAGTTCA TCTACATGCT CGAGGGCGTC ATGGACTACA GCCACAGCCG CTCGGTGTAC
CGGCTGCACC CCGGCGATTC GCTGCAGATC GACGGGGAGG GTGCGCACGG CCCCGTCGAC
CTGGTCGAAC TGCCGATCCG GTTCCTGTCG GTGATCGCGT TCCCGGACTC CGCCGTCTAG
 
Protein sequence
MSPSEDSAPL LRNKSGTARE RDPQEPVDDT EFEAAIGRNV RQLRQQHGLT VAEMAERVGI 
SKAMMSKIEN AQTSCSLSTL ALLAKGFDVP VTTLFRGADV ERPAAFVKAG TGARIVRNGT
KEGHDYQLLG SLRGEHKRLE CLEVTLSEKS RTYPLFQHPG TEFIYMLEGV MDYSHSRSVY
RLHPGDSLQI DGEGAHGPVD LVELPIRFLS VIAFPDSAV