Gene Mjls_5197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_5197 
Symbol 
ID4880895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp5447490 
End bp5448200 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content70% 
IMG OID640142508 
Productputative protease 
Protein accessionYP_001073452 
Protein GI126437761 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0213324 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000208925 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGCGTACCG GACACCGCCG ACTGGCGCTG ATCGTCGCGG GGGCGGCCGT CTGCTTCGCC 
CAGATGCTCG GCGCCGCTCC CACCGCAGGC GCCGCCGGAC CCGTCGTCCT CGGTGGCGGC
TCGGGCATCG TCGTCAACGG TGAGTCCTTC TGCACGCTGA CCACCATCGG CAACGACAAC
CGCGGCAACC TGATCGGTTT CACCTCCGCC CACTGCGGTG GGCCCGGGGC GACGGTGTCG
GCCGAGGGGG CGCCGGACGC GGGCATCCTC GGGACCATGG TCGCGGGCAA CGAGGCGCTC
GACTACGCGG TGATCCAGTT CGATCCGCAG AAGGTCGCGC CGACCAACAA TGTCAACGGC
TTCCAGATCA ACGGCCTCGG ACCCGACCCC GCGTTCGGCC AGGTCGCCTG CAAACTGGGC
CGCACCACCG GCTACTCGTG CGGTGTTACG TGGGGTCCGG GTGAGGACCC CGGCACGATC
GTCAACCAGG TGTGCGGGCA GCCCGGCGAC TCCGGTGCGC CGGTCACGGT CGACAACCGC
CTCGTCGGCA TGATCCACGG CGCCTACACC GAGGGTCTGC CGACGTGCGT GGTGAAGTAC
ATCCCGCTGC ACACCCCGGC CGTCACGATG TCGTTCAACA CCCAACTGGC CGACATCGTC
GCCAAGGGCC GGCCGGGCTC GGGTTTCGTC CCGGTCGGCG CCGTGGCCTG A
 
Protein sequence
MRTGHRRLAL IVAGAAVCFA QMLGAAPTAG AAGPVVLGGG SGIVVNGESF CTLTTIGNDN 
RGNLIGFTSA HCGGPGATVS AEGAPDAGIL GTMVAGNEAL DYAVIQFDPQ KVAPTNNVNG
FQINGLGPDP AFGQVACKLG RTTGYSCGVT WGPGEDPGTI VNQVCGQPGD SGAPVTVDNR
LVGMIHGAYT EGLPTCVVKY IPLHTPAVTM SFNTQLADIV AKGRPGSGFV PVGAVA