Gene Mjls_5190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_5190 
Symbol 
ID4880888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp5439376 
End bp5439954 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content77% 
IMG OID640142501 
Producttype II secretion system protein 
Protein accessionYP_001073445 
Protein GI126437754 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.139596 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000686887 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGAGCGCGG CGGCGGCCCT GCTGGCCCTG GCGCTGCTGC TGACCGGCCG CGACGGCGGT 
GTGCGGATGG GCCGGTTGCG CACGGCCGGG CGGCGGACCG CCCGGCCAAC CGAGCGGGGC
GGAGCGGACC CACTCGCAGC GGCGTCGACC TTCGACGTGC TGACGGCCTG CCTGACCTCG
GGAATGGCGG TGTCGTCGGC CGCGTCCGCG GCGGCGGCCT CAGCACCGAC CGGCCTGGCC
GCAATCCTCG CGAGGGCCGC CGACATGCTG GCGCTCGGCG CGGACGCGGC GACCGCCTGG
TCGGACCCCG GGACCCCGCT CGACGACCAT GCCCGCGCCC TGATGCGACT GGCCCGGCGG
TCCGCGGAGT CCGGTACGGC GCTCGCGCAG GGCGTCGCCG ACCTGGCGGC CGAATCGCGA
AGCGACGCAG CCGATGCGGC GCGGGCCACC GCAGAGCGGG CAGGTGTCCT GATCGCCGCG
CCGCTCGGAG TGTGTTACCT GCCGGCCTTC CTGTGCCTGG GCATCGTGCC CGTGGTGGTC
GGCCTGGCCG GGGACGTCCT GCAGTCGGGG TTGTGGTGA
 
Protein sequence
MSAAAALLAL ALLLTGRDGG VRMGRLRTAG RRTARPTERG GADPLAAAST FDVLTACLTS 
GMAVSSAASA AAASAPTGLA AILARAADML ALGADAATAW SDPGTPLDDH ARALMRLARR
SAESGTALAQ GVADLAAESR SDAADAARAT AERAGVLIAA PLGVCYLPAF LCLGIVPVVV
GLAGDVLQSG LW