Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mjls_5029 |
Symbol | |
ID | 4880727 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. JLS |
Kingdom | Bacteria |
Replicon accession | NC_009077 |
Strand | - |
Start bp | 5269813 |
End bp | 5270598 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640142339 |
Product | short chain dehydrogenase |
Protein accession | YP_001073284 |
Protein GI | 126437593 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.30549 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCTCG GGTTACTGAA GGACAAGGTC GTCGTCGTCA GCGGCGTCGG CCCGGCGCTC GGCACCACAC TGGCCCGGCG CTGCGCGGAG GAGGGTGCCG ACCTGGTGCT CGCCGCGCGC ACGGTCGAAC GCCTCGAGGA CGTCGCCAAG CAGATCACCG ATCTGGGGCG ACGCGCGGTG TCGGTGGGCA CGGACATCAC CGACGAGGCG CAGGTGGCCA ACCTGGTCGA CCAGTCGCTC GAGGCCTACG GCAGGGTCGA CGTGTTGATC AACAACGCCT TCAGGGTGCC GTCGATGAAG CCGTTCGCGA ACACCACCTT CGAGCACATG CGCGACGCCA TCGAGTTGAC CGTGTTCGGC GCCCTGCGCA TGGTCCAGGC CTTCACCCCG GCGCTGGCCG AAGCCAAGGG GTCCGTCGTC AACGTGAACT CGATGGTGGT GCGGCACTCC CAGGCCAAAT ACGGCGCCTA CAAGATGGCC AAATCCGCGC TGCTGGCGAT GTCACAGACG CTGGCCACCG AGCTCGGTGA ACAAGGCATT CGAGTGAATT CGGTTGCCCC CGGATATATC TGGGGTGAAA CCCTGAAGAG TTACTTCAAT CACCAGGCGG GTAAGTACGG GACGACCGTC GAGGAGATCT ACCAGGCGAC CGCGGCGGCG TCCGACCTCA AGCGGTTGCC CACCGAGGAC GAGGTGGCCT CGGCGATCCT GTTCATGGCC AGCGATCTGT CCAGCGGTAT CACCGGGCAG ACTCTGGATG TCAACTGCGG GGAGTACAAG GCATGA
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Protein sequence | MALGLLKDKV VVVSGVGPAL GTTLARRCAE EGADLVLAAR TVERLEDVAK QITDLGRRAV SVGTDITDEA QVANLVDQSL EAYGRVDVLI NNAFRVPSMK PFANTTFEHM RDAIELTVFG ALRMVQAFTP ALAEAKGSVV NVNSMVVRHS QAKYGAYKMA KSALLAMSQT LATELGEQGI RVNSVAPGYI WGETLKSYFN HQAGKYGTTV EEIYQATAAA SDLKRLPTED EVASAILFMA SDLSSGITGQ TLDVNCGEYK A
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