Gene Mjls_4850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_4850 
Symbol 
ID4880549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp5097960 
End bp5098772 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content71% 
IMG OID640142156 
ProducttRNA/rRNA methyltransferase (SpoU) 
Protein accessionYP_001073106 
Protein GI126437415 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.495408 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0422374 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACGAGCG TCATCGACGT CGACGACCCC GCCGATCCGC GCCTCGACGA CTTCCGGGAC 
CTCAACAGCA TCGACCGCAG ACCCGATCTG CCCAGCGGCA AGGGTTTGGT GATCGCCGAG
GGTGTGCTGG TGGTGCAGCG CATGGTGGCC TCGCGGTTCA CCCCGCGCGC GCTGCTCGGC
ACCGACCGCC GGCTCACCGA ACTCGGTACC GACCTCGACG CCGTCGACGC CCCGTTCTAC
CGCGCCGACG CCGAGGTGAT GGCCGAGGTC GTCGGCTTCC ACCTGAATCG GGGTGTACTG
GCGTCGGCGT CGCGGCCGCC GGAGATCAGC GTGGCCGACG CGCTCGACGG CGCCCGCGCC
GTGGCGGTGC TCGAAGGTGT CAACGACCAC GAGAACCTCG GGTCGATCTT CCGCAACGCC
GCGGGCCTCG GCGTCGACGC GGTGATCTTC GGGGCCGGAT GTGCCGACCC GCTCTACCGG
CGGGCGGTGC GGGTGTCGAT GGGCCATGCG CTGATGGTGC CGTTCGCCCG CGCAGCCACG
TGGCCGGATG AGCTGAACAC GTTGCGCGAC AAGGGGTTTC AGTTGCTGGC GATGACGCCG
GACCCCGCCG CCGACACCCT GGCCACGGCG ATGACGGCGC TGGCCGGCGA GAAGGTCGCC
TTCCTCGTCG GCGCGGAGGG ACCGGGCCTG ACCGAGCGGG TGATGCGGGC CAGCGACCGG
CGGGTGCGCA TCCCGATGTC GCGGGGCACC GATTCGCTCA ACGTCGCGAC CGCTGCCGCG
CTGGCGTTCT ACGAACGGGT CCGATCCGGC TAG
 
Protein sequence
MTSVIDVDDP ADPRLDDFRD LNSIDRRPDL PSGKGLVIAE GVLVVQRMVA SRFTPRALLG 
TDRRLTELGT DLDAVDAPFY RADAEVMAEV VGFHLNRGVL ASASRPPEIS VADALDGARA
VAVLEGVNDH ENLGSIFRNA AGLGVDAVIF GAGCADPLYR RAVRVSMGHA LMVPFARAAT
WPDELNTLRD KGFQLLAMTP DPAADTLATA MTALAGEKVA FLVGAEGPGL TERVMRASDR
RVRIPMSRGT DSLNVATAAA LAFYERVRSG