| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_4788 |
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| Symbol | |
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| ID | 4880487 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium sp. JLS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009077 |
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| Strand | - |
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| Start bp | 5035712 |
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| End bp | 5036557 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640142094 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001073044 |
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| Protein GI | 126437353 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.716012 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGAGC CGCTGAACCT CGAGGGCCGG ACCGTCGTCG TCTCCGGTGC AGGTGGCGGG
GGTATCGGAA CGACGGTCAC CGAACTGGCG GCCACGGCGG GGGCGACCGT CGTCGCGGTC
AGCCGCAACC AGGACAACCT CGACCAGCAC GTCGGGCCGC TGATCGCCAA GGGGCTGCCG
GTCGTCACGG TCGCGGCCGA CGCGTCGACC GACGAGGGCA TCGCCCGTGT CCTCGACGAG
GCGCGGCGCG CCGACGGCGA CCTCTACGGC TTGGTCAACG TCGCCGGCGG CGCCGCACCC
GCGACGTGGA TGCCGTCGAC CCGGGTCACC CGCGACGATT GGCGGGCGCT GTTCACCGCC
AACCTCGAAA CCGCCTTCTT CATGAGCCAG GCCGTCGCCG CCGAGATCCG GTCGAACGGG
CACAAGGGGT CGATCGTCTC GGTGTCGTCG ATCAGCGGGA TGAACACCGC GCCGTTCCAC
ATCGCCTACG GGACAGCCAA AGCCGCGGTG GTCGCGATGA CCCGCACCAT GGCCGTCGAA
CTGGCGCTCG ACGGGATCCG CGTCAACGCC GTCGCCCCCG GCGTCACCGA GACCGCCGCC
TCGGCGACCT ATGTCGACCA GGATCCGGAC CGCGACCGCA CCGCGATCGC GATGGGCCGC
CGCGGAACGC CGGTCGAACA GGCGAACGCC ATCCTGTTCC TGCTCTCGGA CATGTCGAGC
TACATCACCG GCCAGACGCT TCTGGTCGAC GGTGGCCTCG ACCTCAAGTG GACGCATCTG
GGCGCCGACA ACACGTCGTT GTTCCTCAAG GACGAGAACT TCCGCAGCTC CATCAGCCGG
TTCTGA
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| Protein sequence | MTEPLNLEGR TVVVSGAGGG GIGTTVTELA ATAGATVVAV SRNQDNLDQH VGPLIAKGLP
VVTVAADAST DEGIARVLDE ARRADGDLYG LVNVAGGAAP ATWMPSTRVT RDDWRALFTA
NLETAFFMSQ AVAAEIRSNG HKGSIVSVSS ISGMNTAPFH IAYGTAKAAV VAMTRTMAVE
LALDGIRVNA VAPGVTETAA SATYVDQDPD RDRTAIAMGR RGTPVEQANA ILFLLSDMSS
YITGQTLLVD GGLDLKWTHL GADNTSLFLK DENFRSSISR F
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