Gene Mjls_4472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_4472 
Symbol 
ID4880176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp4699709 
End bp4700386 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content65% 
IMG OID640141780 
ProductNLP/P60 protein 
Protein accessionYP_001072733 
Protein GI126437042 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.168401 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCCCGAT TGGGAATCGT TCTTGGTCTT GTCGGGCTAT TGCTCGGCCT CAACCTGCCC 
GCGCGAGCTG TCGCCGACGA GAGCCTGTGG GATCCGACAT TGCCAAAAGT CCTCAGCGCC
GGCGCACCAG GCGATCCCAT CGCGATCGCG AACGCCTCGC TGCAAGCGAC GAATGTCGCC
ACCCAGACCA CGCTGGACCT CGGTCGAAAG TTCCTCAGCA GCCTCGGCCT CGGAGGTAGC
CGAACGACGG TGGCTCCCGG ACGCCGCGTG TACGGCAGGC AGGCGATCGA GTACGTAATT
CGTCGCGCCG GCTCCCAGAT AGGTGTGCCG TACTCCTGGG GCGGGGGCAG CCTGACAGGT
CCGAGTCGCG GCGTCGACGG CGGCGCTGAC ACGGTGGGCT TCGACTGCTC GGGCCTAACG
CGCTATGCGT TCGCCGGCGT CGGTGTACTG CTTCCGCGTT ACTCCGGAGA CCAGTACACC
GCGGGCCGCC AGGTACCGCC CTCAGAAGCC AAGCGCGGCG ACCTCCTGTT CTGGGGTCCG
GGCGGCAGCC AACACGAAGC CCTCTACCTC GGCGGCGGCC AAATGCTCGA GGCGCAGCAA
ACAGGCGTAC CGGTCAAAAT CTCACCGGTA CGAACCGGTG GCATGACGCC GTATGTGACG
CGCATTATCG AAAGTTGA
 
Protein sequence
MSRLGIVLGL VGLLLGLNLP ARAVADESLW DPTLPKVLSA GAPGDPIAIA NASLQATNVA 
TQTTLDLGRK FLSSLGLGGS RTTVAPGRRV YGRQAIEYVI RRAGSQIGVP YSWGGGSLTG
PSRGVDGGAD TVGFDCSGLT RYAFAGVGVL LPRYSGDQYT AGRQVPPSEA KRGDLLFWGP
GGSQHEALYL GGGQMLEAQQ TGVPVKISPV RTGGMTPYVT RIIES