| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_4241 |
|---|
| Symbol | |
|---|
| ID | 4879946 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | - |
|---|
| Start bp | 4478797 |
|---|
| End bp | 4480410 |
|---|
| Gene Length | 1614 bp |
|---|
| Protein Length | 537 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640141549 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001072503 |
|---|
| Protein GI | 126436812 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.189048 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCATCGA TCGTCTGTTC CTCCCTGTCG TTCGCCTGGC CCGACGGCAC CACGGTTTTC
AGCGAGCTGA CCGCCTCTTT CGGTGACGGC CGCACCGGCC TGGTCGCGCC CAACGGTGCG
GGCAAATCCA CTCTGCTGCG GCTGATCGCG GGGGAGTTGT CGCCGTCGGC CGGGACCGTG
AGCGTCACCG GGACACTCGG TCACCTCCCG CAGACCCTGC CGCTGGCGGC CGACCTCACC
GTCGCCGACG TGCTCGGTGT CGCTCCGGTG ATCGCCGCGC TGAACGCACT CGCCGAAGGT
GATGCCGGTG ACGACGTGTT CACGGCCATC GGCGACGACT GGGATGCCGA AGAATGCGCC
CGCGCCCAAC TGGACCGGTT GGGGCTCGCG CACGTAGCGC TCGACCGTCG CCTCGAAACG
CTGTCCGGCG GCGAGATCGT CTCCGTGGGC CTGGCGGCGA AACTCCTCGA GCGGCCCGAC
GTGCTGCTGC TCGACGAGCC GACTAACAAC CTCGATGCCG ACGCCAGGAA CGCGCTGTAC
GCCGCGCTCG ACGATTTCGC CGGCACCCTG CTGCTGGTCA GCCACGACCG GGTGCTGCTC
GACCGGATGG ACCGGATCGC CGAACTGAGC CGTGGCGAAA TCGTCTTCTA CGGCGGCAAT
TTCACCGCCT ACCGGGAGGC GGTGGCAGCC GAGCAGCAGG CCGCCGAAAG CGACCTCCGC
AACGCCGAGC AACAGCTCAA ACGCGAGAAG CGTCAGATGC AGGAGGCCCG CGAGCGCGCG
GGGCGGCGTT CGAACACCGC GGTGCGCAAC CTCGCCGACG CGGGTCTGCC GAAGATCCTC
GCCGGGGCCA GGAAGCGCAG GGCCCAGGAG TCCGCAGGCA GGGCCGACGA CGTACACGCC
AGGCGGGTGG GTGACGCCAG GGTTCGGGTC GAGGACGCCG AGCGTTCGCT GCGTGACGAC
GATGCGATCG CGCTCGACCT GCCCGACACC GAGGTGCCCG CCGGCCGCAA CCTGTTCGCC
GGGCACGGGC TCCGCATCGC CCGCGGCGGC CGGGAGCTGT TCGCGGACAA CGGAATCGAC
CTCTCGCTCC GGGGGCCGGA GCGGGCCGCC CTCACGGGAC CGAACGGGGC GGGCAAATCC
ACGCTGCTGC GGATCATCGC CGGCGCCGTC GAGCCCGACG CGGGTGCCGT GCAGCGCGCC
GACGGCCGAA CCGCCTACAT CTCCCAGCGG CTGGACCTGC TCGACGACGA CCTGTCGGTG
GCCGAGAACC TGGCCCGCTT CGCGCCGGAC ATGACCGTGA CCAGAAGCCG ACACCTGTTG
GCGCAGTTCC TGTTCCGCGG TGACCGCATC CATCTGCCGG TGTCGGTGCT CTCGGGCGGC
GAGCGGCTGC GGGCGACGCT GGCGTGCGTG CTCTACGGCG AACCTGCGCC GCAGCTGCTC
CTGCTCGACG AGCCGACCAA CAACCTCGAC CTGGTCAGCG TCGGCCAGCT CGAATCGGCC
CTCGATGCCT ACCGGGGTGC GTTCGTGGTG GTGAGCCACG ACGAGCGGTT CCTGGCCCAG
ATCGGCGTGG ACCGGTGGCT TCGCCTGGCC GATGGGGTGC TGGTCGAGAG GTGA
|
|---|
| Protein sequence | MSSIVCSSLS FAWPDGTTVF SELTASFGDG RTGLVAPNGA GKSTLLRLIA GELSPSAGTV
SVTGTLGHLP QTLPLAADLT VADVLGVAPV IAALNALAEG DAGDDVFTAI GDDWDAEECA
RAQLDRLGLA HVALDRRLET LSGGEIVSVG LAAKLLERPD VLLLDEPTNN LDADARNALY
AALDDFAGTL LLVSHDRVLL DRMDRIAELS RGEIVFYGGN FTAYREAVAA EQQAAESDLR
NAEQQLKREK RQMQEARERA GRRSNTAVRN LADAGLPKIL AGARKRRAQE SAGRADDVHA
RRVGDARVRV EDAERSLRDD DAIALDLPDT EVPAGRNLFA GHGLRIARGG RELFADNGID
LSLRGPERAA LTGPNGAGKS TLLRIIAGAV EPDAGAVQRA DGRTAYISQR LDLLDDDLSV
AENLARFAPD MTVTRSRHLL AQFLFRGDRI HLPVSVLSGG ERLRATLACV LYGEPAPQLL
LLDEPTNNLD LVSVGQLESA LDAYRGAFVV VSHDERFLAQ IGVDRWLRLA DGVLVER
|
|---|
| |