Gene Mjls_4143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_4143 
Symbol 
ID4879849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp4376955 
End bp4378166 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content66% 
IMG OID640141452 
ProductL-carnitine dehydratase/bile acid-inducible protein F 
Protein accessionYP_001072406 
Protein GI126436715 
COG category[C] Energy production and conversion 
COG ID[COG1804] Predicted acyl-CoA transferases/carnitine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.648976 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGACA TTCTCAACGG AATCCGTGTC GTCGAACTGG CGGCATGGAC GTTCGTTCCC 
GCCGCCGGTG CCGTGCTTGC CGACTGGGGC GCCGACGTCA TCAAGATCGA GCATCCCGAA
ACCGGTGACC CCCAGCGGGG GCTCATCAGC TCTGGCATCG TCACCGGTGC GGGGGGAGTG
AACCACTTCA TCGAGCAGCC CAACCGCGGC AAGCGAAGCA TCGGGCTCGA TACCTCCACC
CCCGAGGGAC TGGAGCTGCT GATGAAGTTG CTCGAGACGG CCGACGTGTT CGTCACCAAC
CTGCTACCGG ATTCCCGTCA GCGGATGGGC ATCGACGTCG AGCAGGTCCG GGCCCGCAAC
CCCAAGATCA TCTACGCGCG CGGGCACGGG TACGGCATCA AGGGCGACCA GGCGTCCCAG
GGCGGCTTCG ACCTCGCTGC GTACTGGTCG CGCGGCGGAA TCGGCGACGC GTACTCCGAC
GGCGACGGCT CCTATCCGCC GATCCAGCGG CCGGCGTTCG GCGACTCCTA CGGCGGCCTG
GCGATCGCAG CCGGAATCGC CGCGGCCCTG GTGAAACGCG AACGCACCGG CGAGCCGTCG
GTCGTCGACG TATCCCTCCT GAACGCCGCC ATCTGGCAGC TGGGCCCCGA CATCGTGGGT
GCGGGCGTCA CCGGTCAGGA CATCCCGAAG TTCAATCTGG ACGAGATGCC CAACCCGGTG
GCCAGCATCT ACCGGACCCG CGACAACCGG TTCATCTCGT TCGTCCTGTT GCAGGCCGAC
CGGTTCTGGG CGGACTTCTG TACCCGACTG GGCAGGCCCG AACTCATCGA CGACGAACGG
TTCGCCAGTG CCGTGGTGCG CTTCGGCAAC CGCAAGGACT GCATCGCCGA GCTGCGCCGC
AGCTTCGAAT CCGAGGATCT TGCCCACTGG GAGAAGGCAT TCGCCGGCTT CGACGGGGTG
TGGGACGTCA TGCGCACCGC CCACGAGCTG CACAGCGATC CGCAGGCGAT CGCGAACGGA
TACCTGCCCC GCGTCACGGA TGCCAAGAAC AACGAATTCT CGTTGGCGGC CAGCCCGGTG
CAGTTCGACG AGACGCCGCT GGAGCTGACG TGCGCGCCGG AACACGGCGC GCACACCGAT
GCGCTGCTCG CCGAGCTCGG CTTCAGCGAG GACGAGATCA TCGATTTCAA GATCAATTCG
GTCGTGTTGT AG
 
Protein sequence
MTDILNGIRV VELAAWTFVP AAGAVLADWG ADVIKIEHPE TGDPQRGLIS SGIVTGAGGV 
NHFIEQPNRG KRSIGLDTST PEGLELLMKL LETADVFVTN LLPDSRQRMG IDVEQVRARN
PKIIYARGHG YGIKGDQASQ GGFDLAAYWS RGGIGDAYSD GDGSYPPIQR PAFGDSYGGL
AIAAGIAAAL VKRERTGEPS VVDVSLLNAA IWQLGPDIVG AGVTGQDIPK FNLDEMPNPV
ASIYRTRDNR FISFVLLQAD RFWADFCTRL GRPELIDDER FASAVVRFGN RKDCIAELRR
SFESEDLAHW EKAFAGFDGV WDVMRTAHEL HSDPQAIANG YLPRVTDAKN NEFSLAASPV
QFDETPLELT CAPEHGAHTD ALLAELGFSE DEIIDFKINS VVL