| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_4095 |
|---|
| Symbol | |
|---|
| ID | 4879802 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | + |
|---|
| Start bp | 4328058 |
|---|
| End bp | 4329080 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640141405 |
|---|
| Product | acyl-CoA dehydrogenase domain-containing protein |
|---|
| Protein accession | YP_001072359 |
|---|
| Protein GI | 126436668 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.306057 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACTTCG GATTGACCGA TGAACAGGAT CAGCTCGCCG AGGCCGAGCG AGCCTGGCTC
AACCGAAACG ATCCCGTCGC CCGGGTCCGC GCGACACTGG ACTCGGAAGC CATCACCATC
GACAGGGCAG CAGTCGCCCA CGCCGCGGAA TCCGGCCTGT TGGCACTGCT CACCCCGGAA
ATCGGGGGAT GTCACGTGGA TCTCGCGGTC GTGGCCGAGG CGCACGGCGC GGCGGCGAGC
TCGCTGCCCA TCGCCGACCT GGCGATCGCC GCCTGGGTGC TCGACAGCGT CGGGATGCCC
CACGCGGAGG CCGCCGCCGC GGGCGACGCA CTGGTCGGCC TGACGTTTGG CCCGACCGTT
GCCGCCGACG GCGACGCACT GCACCTCGTC GGCGCGAGCA GTCCAGTCCC CATGGCCCAG
GGCATGGACG CCGTGGCCGT GGCCGGACGC GTCGGCGAAC GGGAGTACCT GACGGTGCTC
ACCGCACCCA CCTGGTCGGG GATGTCGACG TTCGACCTGA CCCGCTCGTG GGCACGGGTG
AATCTCGACG CCGCGATCGA CGATTGGACG GAGCTGCCGC CGGGGACGCT GGCCATGCTG
CGCGACGCGC TTGCAGTGCA TCGGGCGTTC GACGCGCTGG GCGCCGCCGC GCGCCTGCTC
GACATGACGG TGTGCTACGC CGGGCAACGA GAACAGTTCG GCACCCCGAT CGGCTCGTTC
CAGGCTGTCA AGCATCACTG CGCCGACATG GCCCTCGCCG TGGAGGCAAG CAGGGCGACA
CTGTGGGCCG CAGCGCTCGC GCTGGACACT TCTTCTGGCA CAGCACGATC CCGCGCTGCG
TCGGCCGGGG CGGCGTACGC GAAGTCGGCG GCCGCCCGGG TCGCGGGCAC TGCGTTGCAG
GTGCACGGCG GCATCGGATT CACCTGGGAG CACGACCTTC ATCTGCTCCT CCGCCGCATC
AAGGTCGACG AGGCCTTCGA CGGCACCGTC GCCGAACACC GCGCGGCACT GATCACGGCC
TGA
|
|---|
| Protein sequence | MDFGLTDEQD QLAEAERAWL NRNDPVARVR ATLDSEAITI DRAAVAHAAE SGLLALLTPE
IGGCHVDLAV VAEAHGAAAS SLPIADLAIA AWVLDSVGMP HAEAAAAGDA LVGLTFGPTV
AADGDALHLV GASSPVPMAQ GMDAVAVAGR VGEREYLTVL TAPTWSGMST FDLTRSWARV
NLDAAIDDWT ELPPGTLAML RDALAVHRAF DALGAAARLL DMTVCYAGQR EQFGTPIGSF
QAVKHHCADM ALAVEASRAT LWAAALALDT SSGTARSRAA SAGAAYAKSA AARVAGTALQ
VHGGIGFTWE HDLHLLLRRI KVDEAFDGTV AEHRAALITA
|
|---|
| |