| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_4029 |
|---|
| Symbol | |
|---|
| ID | 4879737 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | + |
|---|
| Start bp | 4261466 |
|---|
| End bp | 4262056 |
|---|
| Gene Length | 591 bp |
|---|
| Protein Length | 196 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640141340 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_001072294 |
|---|
| Protein GI | 126436603 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACGGG GTGACCGTTC GCCACGAAAC GAGCATGCGG ACCGGACCCG GATGGCACTG
CTGGAGGCGG CACTGAATCT GTTCAGTGCC AAAGGCTATG ACGAGACGAC GACGGACGAG
ATCGCGGCTA GCGCAGGCGT GTCCCCGCGG ACGTTCTTCC GTTACTTCCC GACCAAGGAG
TCGGTCCTCT TCTTCGGCGA ATACGACTTC ATCGACGCCG TCGGTGGCGT GTATCTCGCG
CAGCCCGAAG GCGCATCCGA CTTCGAGGCG ATGGCGAACT CGTTCGCGTT GCTTGCTCCG
GGGCTCAAGC GCATCCGTAA GCGGATCGCG CAGTATCACG AAGCGGTTGC GTCATCGCTG
GTCCTGCTCG GCCGCGAGCG CAAGAACCAC GAGGCCAACG CCGAGACCGT GGCGAAGATC
ATTGCGCAGC GGCGCCATCT GCCGTCGCCC GACAGCGAAT GCCGACTGCT CGCATCGGTC
GGGATGCTGC TCGTGGAGCG CGCACTCAAT CAGTGGTTGG CGGCGCCGGG CCGCGCCCTC
GACGACATCA TCCGGCAGGA ATTCGCGGCG CTGCCCGCCG TGTTGAAGTA A
|
|---|
| Protein sequence | MARGDRSPRN EHADRTRMAL LEAALNLFSA KGYDETTTDE IAASAGVSPR TFFRYFPTKE
SVLFFGEYDF IDAVGGVYLA QPEGASDFEA MANSFALLAP GLKRIRKRIA QYHEAVASSL
VLLGRERKNH EANAETVAKI IAQRRHLPSP DSECRLLASV GMLLVERALN QWLAAPGRAL
DDIIRQEFAA LPAVLK
|
|---|
| |