Gene Mjls_3924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_3924 
Symbol 
ID4879633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp4145370 
End bp4146014 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content68% 
IMG OID640141236 
Producttwo component LuxR family transcriptional regulator 
Protein accessionYP_001072190 
Protein GI126436499 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.278782 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATCG TGATCGCCGA GGACTCCGCG CTGCTGCGCG CCGGAATCGA GCGCATCCTC 
GCCGACGCCG GCCACGAGGT GGTCGCCGGA GTTCCCGACG CCACCAACCT GTTACGACTG
GTCAACGAGA CCCGGCCCGA TCTGGCGATC CTCGACGTCC GGATGCCGCC GACCTTCACC
GACGAGGGCA TCCGCGCCGC CGCGCTGCTG CGCAGCCAGA ACCCGGAGTC CCCGGTCCTG
GTCCTGTCGC ACTACGTCGA GCAGCGCTAC GCCGCCGAGT TGATCGCCTC GGACACAAAG
GGTTTCGGCT ACCTCCTGAA GGACCGGGTG GCCGACGTCC CGGCATTCCT CGACGCGGTC
GAGGTCGTCG GCCACGGCGG TACGGTGCTG GATCCGGAGG TGGTCTCCCA GATCCTGGTG
CGGTCACACC GGCGCGCGGC ACTCGACCAG TTGACTCCCC GTGAGCACGA GGTGCTCCAA
CTCATGGCGG AGGGCAAGAC GAACTCGGCG ATCGCGAGCG GGATGCACAT CTCGGTCGGA
TCGGCCGAGA AGCACATCGC CTCGATCTTC ACGAAATTGA ACCTCGCCCC CGACGAGACC
GAGAACCGCC GCGTGCTGGC CGTCCTGCGG TTCCTCGAAT CCTGA
 
Protein sequence
MRIVIAEDSA LLRAGIERIL ADAGHEVVAG VPDATNLLRL VNETRPDLAI LDVRMPPTFT 
DEGIRAAALL RSQNPESPVL VLSHYVEQRY AAELIASDTK GFGYLLKDRV ADVPAFLDAV
EVVGHGGTVL DPEVVSQILV RSHRRAALDQ LTPREHEVLQ LMAEGKTNSA IASGMHISVG
SAEKHIASIF TKLNLAPDET ENRRVLAVLR FLES