Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mjls_3882 |
Symbol | |
ID | 4879592 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. JLS |
Kingdom | Bacteria |
Replicon accession | NC_009077 |
Strand | - |
Start bp | 4109511 |
End bp | 4110848 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640141194 |
Product | homoserine dehydrogenase |
Protein accession | YP_001072149 |
Protein GI | 126436458 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0460] Homoserine dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.5608 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAGTG ACAAATCGGT AGGCGACACA CCGGTGGGCG TAGCCGTCCT GGGCCTCGGC AATGTGGGCA GTGAAGTGGT CCGCATCATC GAGCAGAGCG CGACCGACCT GGCGGCGCGT GTCGGCGCCC CCCTCGTACT GCGCGGGGTT GGGGTGCGCC GGGTGGCCGG CGACCGCGGG GTGCCCGTCG ACATGCTCAC CGACAACATC GAAGAACTGG TCTCGCGCGA GGACGTCGAC ATCGTCGTCG AGGTGATGGG TCCGGTCGAA CCGGCCCGCA AGGCGATCCT CTCCGCGCTC GAACAGGGCA AGTCGGTCGT GACCGCGAAC AAGGCGCTGA TGGCCCAGTC GACCGGTGAG CTGGCGCAGG CCGCCGAGGC CGCCCGGGTC GACCTGTACT TCGAGGCCGC GGTGGCCGGT GCCATCCCGG TGATCCGCCC GCTGACCCAG TCGCTGGCCG GCGACACGGT GCTGCGGGTG GCCGGGATCG TCAACGGCAC AACGAATTAC ATCCTGTCGG CGATGAACGA CACCGGCGCC GACTACGACA GTGCGCTGGC CGATGCCAGT GCGCTCGGCT ACGCGGAGGC GGATCCGACC GCCGACGTGG AGGGTTTCGA CGCCGCGGCC AAGGCCGCGA TCCTGGCGTC CATCGCGTTC CACACGCGGG TGACGGCCGA CGACGTCTAC CGCGAAGGCA TCACCAAGGT CACCGCCGAG GACTTCGAAT CCGCCCGCTC GCTCGGGTGC ACCATCAAGT TGCTCGCCAT CTGTGAGCGG CTGACCACCG ACGACGGCCA ACAGCGCGTC TCGGCCCGGG TCTACCCGGC GCTGGTTCCG CTCGACCACC CGCTGGCATC GGTCAACGGC GCGTTCAACG CCGTGGTGGT CGAGGCCGAG GCTGCCGGCC GCTTGATGTT CTACGGCCAG GGCGCCGGTG GCGCGCCGAC CGCATCGGCG GTCATGGGCG ATCTCGTGAT GGCCGCGCGC AACCGCGTCC AGGGCGGGCG CGGACCGCGG GAGTCGAAGT ACGCCAAGCT GCCGGTGTCG CCGATCGGGT TCATCCCCAC GCGGTACTAC GTCAACATGA ACGTCGCCGA CCGTCCTGGC GTGTTGTCCA CGGTCGCAGC CGAATTCGCC AGGCATGAGG TCAGCATCGC CGAGGTGCGC CAGGAGGGTG TGGTCGACGA GGGCGGACAG CCCTGCGGTG CGCGCATCGT CGTCGTCACC CACCGTGCGA CCGATGCGGC GTTGTCCGAA ACCGTCTCGG CCCTGGCCGA ACTCGACGTC GTGCAGAGCG TCAACAGCGT GCTGCGCATG GAAGGAACAA GCGAATGA
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Protein sequence | MNSDKSVGDT PVGVAVLGLG NVGSEVVRII EQSATDLAAR VGAPLVLRGV GVRRVAGDRG VPVDMLTDNI EELVSREDVD IVVEVMGPVE PARKAILSAL EQGKSVVTAN KALMAQSTGE LAQAAEAARV DLYFEAAVAG AIPVIRPLTQ SLAGDTVLRV AGIVNGTTNY ILSAMNDTGA DYDSALADAS ALGYAEADPT ADVEGFDAAA KAAILASIAF HTRVTADDVY REGITKVTAE DFESARSLGC TIKLLAICER LTTDDGQQRV SARVYPALVP LDHPLASVNG AFNAVVVEAE AAGRLMFYGQ GAGGAPTASA VMGDLVMAAR NRVQGGRGPR ESKYAKLPVS PIGFIPTRYY VNMNVADRPG VLSTVAAEFA RHEVSIAEVR QEGVVDEGGQ PCGARIVVVT HRATDAALSE TVSALAELDV VQSVNSVLRM EGTSE
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