Gene Mjls_3864 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_3864 
Symbol 
ID4879574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp4092101 
End bp4093747 
Gene Length1647 bp 
Protein Length548 aa 
Translation table11 
GC content66% 
IMG OID640141176 
ProductF0F1 ATP synthase subunit alpha 
Protein accessionYP_001072131 
Protein GI126436440 
COG category[C] Energy production and conversion 
COG ID[COG0056] F0F1-type ATP synthase, alpha subunit 
TIGRFAM ID[TIGR00962] proton translocating ATP synthase, F1 alpha subunit 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.283904 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0308391 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAGT TGACTATCTC GGCTGCTGAC ATCCAAGGGG CGATCGAGGA CTACGTCGCC 
AACTTCGCCA CCGACACCGA GCGGGAAGAG ATCGGCACCG TCATCGACGC CGGTGACGGT
ATCGCGCACG TCGAGGGCCT GCCCTCGGTG ATGACGCAGG AGCTGCTCGA GTTCCCCGGC
GGTGTCCTGG GTGTCGCGCT CAACCTCGAC GAGCACAGCA TCGGTGCGGT CATCCTCGGT
GACTTCGAGA AGATCGAAGA GGGCCAGCAG GTCAAGCGCA CCGGCGAGGT GCTGTCGGTG
CCGGTGGGTG ACGGTTACCT CGGCCGCGTG GTCAACCCGC TCGGTCAGCC GATCGACGGC
CGCGGAGAGA TCGAGACCAC CGATCGTCGT GCGCTCGAGC TGCAGGCGCC CTCGGTGGTG
CAGCGCCAGG GCGTGAGCGA GCCGCTGCAG ACCGGTATCA AGGCGATCGA CTCGCAGACC
CCGATCGGCC GCGGCCAGCG CCAGCTGATC ATCGGTGACC GCAAGACCGG CAAGACCGCG
GTCTGCGTCG ACACGATCCT CAACCAGCGG CAGAACTGGG AGACGGGCGA CCCGAACCAG
CAGGTGCGCT GCGTGTACGT CGCGATCGGC CAGAAGGGCA CCACGATCGC CAGCGTGCGC
CGCACGCTCG AAGAGGGCGG CGCGATGGAC TACACCACCA TCGTCGCGGC GCCCGCATCG
GATTCGGCCG GCTTCAAATG GCTTGCGCCC TACACCGGTT CGGCGATCGC CCAGCACTGG
ATGTACGACG GCAAGCACGT CTTGATCGTG TTCGACGATC TGACCAAGCA CGCCGAGGCC
TACCGCGCGA TCTCGCTGCT GCTGCGCCGC CCGCCGGGCC GCGAAGCCTT CCCCGGCGAC
GTGTTCTACC TGCACTCGCG GTTGCTGGAA CGCTGCGCGA AGCTGTCCGA CGAACTCGGC
GGCGGCTCGA TGACCGGATT GCCGCTGATC GAGACGAAGG CCAACGACAT CTCGGCCTAC
ATCCCGACCA ACGTCATCTC GATCACCGAC GGGCAGTGCT TCCTGGAGAC CGACCTGTTC
AACCAGGGTG TGCGTCCCGC CATCAACGTC GGCGTCTCGG TGTCGCGTGT GGGTGGCGCC
GCGCAGATCA AGGCGATGAA AGAGGTGGCG GGCTCACTGC GACTGGATCT GTCCCAGTAC
CGCGAGCTGG AGTCGTTCGC GGCGTTCGCC TCCGACCTGG ATGCGACGTC GAAGGCGCAG
CTGGACCGCG GCGCCCGGCT GGTCGAGCTG CTCAAGCAGC CGCAGAACAG CCCGATGCCC
GTCGAGGAGC AGGTCGTCGC GATCTTCCTC GGCACCAGGG GTCACCTCGA CACGGTGCCG
GTCGAGGACG TGCAGCGTTT CGAGCAGGAG CTGCTCGAAC ACGTCCGTTC GTCCAAGGAG
GAGATCTTCA CCGAGATCCG CGAGAGCAAG AAGCTCTCCG ACGAACTCGA GAAGACGCTG
ACCGATGTGG TCAACGAGTT CAAGAAGGGC TTCGAGACCA CCTCCGGTGA GTCCGTGGTT
CCGGACGAGA ACGTCGAGGC CATGTCCGAG GACGACGTCG AGAAGGAATC GGTGAAGGTC
CGCAAGCCCG CCCCGAAGAA GAAGTAA
 
Protein sequence
MAELTISAAD IQGAIEDYVA NFATDTEREE IGTVIDAGDG IAHVEGLPSV MTQELLEFPG 
GVLGVALNLD EHSIGAVILG DFEKIEEGQQ VKRTGEVLSV PVGDGYLGRV VNPLGQPIDG
RGEIETTDRR ALELQAPSVV QRQGVSEPLQ TGIKAIDSQT PIGRGQRQLI IGDRKTGKTA
VCVDTILNQR QNWETGDPNQ QVRCVYVAIG QKGTTIASVR RTLEEGGAMD YTTIVAAPAS
DSAGFKWLAP YTGSAIAQHW MYDGKHVLIV FDDLTKHAEA YRAISLLLRR PPGREAFPGD
VFYLHSRLLE RCAKLSDELG GGSMTGLPLI ETKANDISAY IPTNVISITD GQCFLETDLF
NQGVRPAINV GVSVSRVGGA AQIKAMKEVA GSLRLDLSQY RELESFAAFA SDLDATSKAQ
LDRGARLVEL LKQPQNSPMP VEEQVVAIFL GTRGHLDTVP VEDVQRFEQE LLEHVRSSKE
EIFTEIRESK KLSDELEKTL TDVVNEFKKG FETTSGESVV PDENVEAMSE DDVEKESVKV
RKPAPKKK