| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_3833 |
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| Symbol | |
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| ID | 4879543 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium sp. JLS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009077 |
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| Strand | - |
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| Start bp | 4053413 |
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| End bp | 4054102 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640141142 |
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| Product | rhomboid family protein |
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| Protein accession | YP_001072100 |
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| Protein GI | 126436409 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.123516 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGTGA CGGGGCCGAC GGGGTCTCCC GCGTACCCGG CGCCGTCCAG CAAGCGGCCC
GCCTGGATCG TCGGCGGCGC CACGATCGTC AGCTTCGTCG TCCTGCTCTA CGTCATCGAA
CTGGTCGATT CGCTCACCGG GCACCGGCTC GACGAGAACG GCATCCGCCC GCTGGAGACC
GACGGCCTGT GGGGCATCGT CTTCTCGCCG CTGCTGCACG CCGACTGGCA ACACCTGCTC
GCCAACACCG GTCCCGCGCT GGTGCTCGGG TTCCTGATGA CCCTGGCCGG GCTGTCCCGG
TTCATCTACG CGACGGCCAT CGTGTGGATC CTCGGCGGCC TCGGCACCTG GCTGATCGGG
AACCTCGGCA CGCACTGCCC CTATGTCGGC GTGCGCTGCG AGGTCAACCA CATCGGTGCG
TCCGGCCTGA TCTTCGGCTG GCTGGCCTTC CTGATCGTGT TCGGCTTCTT CACGCGCAAG
GCCTGGGAGA TCGTCGTCGG GGTCATCGTG TTGTTCGTCT ACGGCGGCAT CCTGCTCGGC
GTGCTGCCCG GCACCCCGGG AGTGTCCTGG CAGGGACACC TGTGCGGTGC GGTCGCCGGG
GTCGTCGCCG CCTACGTCCT GTCCAGTCCG GAACGCAAGG CCCGCGAACT TCGCCGGTCG
CGGACCGCTC CGCCGTACCT GACCTCGTGA
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| Protein sequence | MGVTGPTGSP AYPAPSSKRP AWIVGGATIV SFVVLLYVIE LVDSLTGHRL DENGIRPLET
DGLWGIVFSP LLHADWQHLL ANTGPALVLG FLMTLAGLSR FIYATAIVWI LGGLGTWLIG
NLGTHCPYVG VRCEVNHIGA SGLIFGWLAF LIVFGFFTRK AWEIVVGVIV LFVYGGILLG
VLPGTPGVSW QGHLCGAVAG VVAAYVLSSP ERKARELRRS RTAPPYLTS
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