| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_3793 |
|---|
| Symbol | |
|---|
| ID | 4879503 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | + |
|---|
| Start bp | 4015420 |
|---|
| End bp | 4017021 |
|---|
| Gene Length | 1602 bp |
|---|
| Protein Length | 533 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640141101 |
|---|
| Product | fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein |
|---|
| Protein accession | YP_001072060 |
|---|
| Protein GI | 126436369 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.445361 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGCTT GGGACCATGA GACCGATGTC GTCGTGCTGG GCAGCGGCGG CGCCGGACTG
GCCGCGGCTC TGACCGCCGC CGTACACGGC GCCGCGGTCG AGGTGTACGA GAAGGCTCCG
ACGGTCGGCG GGACCACGGC GGTCTCCGGC GGGATCGTGT GGATTCCGTC GCACGACAGG
GCCGCCGACG AGTTGACCGT CGAGGACGCG CTGGCCTACC TGCGCGCACA GTCACTGGGG
GTGATGGACG ACGACCTGGT GGAGACGTTC GTGCGCACCG GGCCGCAGAT GCTCGAGTTC
GTCGAGGCAC ACAGCGGCCT GCGCTTCTCG GTGGCCGAAG GCTTCCCGGA CTACAAACCC
GAACTGCCGG GCGGACGCCC CGGCGGCGGC CGCTCACTGT CGGCGGCGCC CTTCGACCTC
GCGCGCCTGG GTCCGTGGCG GGACCGGATC ACCTCGTTCC CCGCGGATTT CAGCAACGTG
GGGATCGACG CCGAGACCCG CGCCCGCATC CACGCCTCGG TGGACGAGAC GCTCGAGGAT
CCCTGCGTCG CCGGGACGGC GCTGATCGCC GGCCTGCTCA AGGGTCTGCT CGACGCCGGC
GTCACGCCGC AGACCGAATC CCGCGCCGTC GAGTTGATCG CCACCGACGG GCGCATCGTG
GGTGTGCGAA TCCAGCAGCG CGACAGAGAG ATCCGCGTAC ATGCCCGACG CGCGGTCATC
CTCGGCACGG GCGGGTTCGA ATGGGACCGC GCACTGGTCG AGGCGTTCCT GCGTGGGCCG
ATGCGCGGTC CGGTCTCCCC ACCGAACAAC ACCGGCGACG GTCTGCGGAT GGCGATGGCG
CACGGCGCCG ATCTGGCCAA CATGGGCGAG GCGTGGTGGG TGCCGATCGT GCAGATCCCC
GGCGACACCA TCGACGGACA CCCCCGCAGT CGCAGCGTCC GGCTGGAGCG CACCCGGCCG
CGCAGCATCA TCGTCAACCG GGCCGGTAAG CGGTTCGTCA ACGAGGCCGG TGAGTACAAC
TCGATGGCCG GGGCGTTCCA GTACCTCGAC CCCAAACACG GCTACGTCAA CGATCCGGCC
TGGATCGTGT TCGACTCGCT GCACCTCAAG AAGTACGGAT TCCTCGCGGT GGAACCCGAT
GGCCCCGCCC CGGACTGGTA TTCGAAATCG GGCGACCTCG GCGAACTCGG CGAGAAGACC
GGGATCGACG CCGACGGTCT GGCCCGCACG CTGGCCGACT GGAACCATCA CGTCGCCGAG
GAGCGCGACC CCGACTTCGG CAGGGGCGCA AGCGCTTACG ACGGCTACTG GGGCGACCCG
CAGGCGCCCA CGCCTGCGTT GCAGACCCTG GGGCCGATCG ACACGCCGCC GTACTACGCC
GTGCCGGTGG GCATCGGTGC GATGGGCACC AAGGGCGGCC CCCGCACCGA CCGCGACGGC
CGGGTGCTGC ACGTCAGCGG TGCGCAGATC CCGGGGCTGT TCGCGGCGGG CAACGCCATG
GCCGGCGCGA CGGGTAAGGC CTACGGCGGT GCCGGCGGAA CGCTGGGTCC GGCAATGGTT
TTCGGTTACC GCGCCGGCCG GGCGGCCTCC GGGGCATCCT GA
|
|---|
| Protein sequence | MSAWDHETDV VVLGSGGAGL AAALTAAVHG AAVEVYEKAP TVGGTTAVSG GIVWIPSHDR
AADELTVEDA LAYLRAQSLG VMDDDLVETF VRTGPQMLEF VEAHSGLRFS VAEGFPDYKP
ELPGGRPGGG RSLSAAPFDL ARLGPWRDRI TSFPADFSNV GIDAETRARI HASVDETLED
PCVAGTALIA GLLKGLLDAG VTPQTESRAV ELIATDGRIV GVRIQQRDRE IRVHARRAVI
LGTGGFEWDR ALVEAFLRGP MRGPVSPPNN TGDGLRMAMA HGADLANMGE AWWVPIVQIP
GDTIDGHPRS RSVRLERTRP RSIIVNRAGK RFVNEAGEYN SMAGAFQYLD PKHGYVNDPA
WIVFDSLHLK KYGFLAVEPD GPAPDWYSKS GDLGELGEKT GIDADGLART LADWNHHVAE
ERDPDFGRGA SAYDGYWGDP QAPTPALQTL GPIDTPPYYA VPVGIGAMGT KGGPRTDRDG
RVLHVSGAQI PGLFAAGNAM AGATGKAYGG AGGTLGPAMV FGYRAGRAAS GAS
|
|---|
| |