| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_3754 |
|---|
| Symbol | |
|---|
| ID | 4879464 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | - |
|---|
| Start bp | 3974141 |
|---|
| End bp | 3975349 |
|---|
| Gene Length | 1209 bp |
|---|
| Protein Length | 402 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640141062 |
|---|
| Product | L-carnitine dehydratase/bile acid-inducible protein F |
|---|
| Protein accession | YP_001072021 |
|---|
| Protein GI | 126436330 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.789271 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGACCC TCCCTCCGCT GGCCGGCATC ACCGTCGTGA CGCTGGAACA GGCGGTGTCC
GCACCGATGT GCACGCGCGT ACTCGCCGAC TTCGGTGCCC GGGTGATCAA GATCGAGAAC
CCCAAGGGCG GTGACTTCGC CCGCCACTAC GACGACGTGG TCCACGGTCA GGCCGCCCAC
TTCGTCTGGG CCAACCGCGG CAAGGAGTCG CTGAGCCTCG ACCTGAATTC GCCCGCGGGC
ATGGACATCC TGCACCGGCT GCTCGACGGC GCCGACGTGC TGGTGTCCAA CCTCGCCCCC
GGCGCGACGG CCCGGATGGG CATCGGCGCC GCCGACCTCA AACACCGGCA TCCGCAGGTG
ATCCCGGTCG AGATCGACGG GTACGGCGCC GGCGGGCCGA TCTCGCACAA GCGCGCCTAC
GATCTGCTGA TCCAGGCCGA ATCGGGTGCG TGTGCGGTCA CCGGTTACCC GGGGATGCCG
GCCAAACCCG GTCCACCGGT GGCCGATATC TCGACCGGGC TGTACGCCGC GCTGTCCATC
CTGGCGCTGC TGTATGCGCG CAAGGGGGAC GGCGCCGAAC CGGCCCCCGC GGTCGCGGTC
AGCCTGTTCG ACACCATGAC CGACATCATG GGTTACCAGC TGACCTACAC CCAGCACTCC
GGTGTCGACC AGCAACCGCT GGGGATGAGC TCGCCGGCGG TCGCGCCCTA CGGCGCCTTT
CCGACCAGGG ACGGGCAGAC GGTGGTGCTG GGCACCACCA ACGACCGGGA GTGGCAGCGG
CTGGCTCGGG AGATCATCGA GCGCCGGGAC CTGGCCGACG ATCCGATGTT CGCGAGCAAC
TCCGACCGGT GCGCACACCG CGACATCCTC AACGAGGCGA TCGGATCCTG GTGTGCGCAA
CACGATCTCG CGCACATCCA GAAGAAGGCC GACGACGCCG GTATCGGCAA CTCCCGCTAC
AACCTGCCGA GTGAGGTCGT CGCCCACCCG CATCTGACCG CCCGCGACCG CTGGCGGCCG
GTCGAGACGC CCAACGGCGA GATCTCCGCG CTGCTGCCGC CCCCGGTGAT CGAGGGGTTC
GAACAACCCA TGGGAGCGGT GCCCGGACTC GGTCAGCACA CCGACGCGAT ACTGGGCGGG
CTGGGCCTGT CCGCCGACGA GATCGCCGCG CTGCGTGAGC AGGGCGCGGT CGGTCCGGCA
CAGTCATAG
|
|---|
| Protein sequence | MQTLPPLAGI TVVTLEQAVS APMCTRVLAD FGARVIKIEN PKGGDFARHY DDVVHGQAAH
FVWANRGKES LSLDLNSPAG MDILHRLLDG ADVLVSNLAP GATARMGIGA ADLKHRHPQV
IPVEIDGYGA GGPISHKRAY DLLIQAESGA CAVTGYPGMP AKPGPPVADI STGLYAALSI
LALLYARKGD GAEPAPAVAV SLFDTMTDIM GYQLTYTQHS GVDQQPLGMS SPAVAPYGAF
PTRDGQTVVL GTTNDREWQR LAREIIERRD LADDPMFASN SDRCAHRDIL NEAIGSWCAQ
HDLAHIQKKA DDAGIGNSRY NLPSEVVAHP HLTARDRWRP VETPNGEISA LLPPPVIEGF
EQPMGAVPGL GQHTDAILGG LGLSADEIAA LREQGAVGPA QS
|
|---|
| |