Gene Mjls_3590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_3590 
Symbol 
ID4879301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp3788305 
End bp3789000 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content64% 
IMG OID640140896 
Productputative GAF sensor protein 
Protein accessionYP_001071858 
Protein GI126436167 
COG category[T] Signal transduction mechanisms 
COG ID[COG2203] FOG: GAF domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.443077 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACAGGGT TCGACGAGTG GCTCAACCGC CTGCTCGAGG ACTGCGCGCG TGACGCGGGC 
GAAGATGTCG TTTCGTATGT GGCCCGCGCC GTGGCGTCTC AGATGGTGGC GGATCTGAGG
CGTACCGAAC GGGCCTCGAT CGACGAACTC ATGGCGCACC TCAACGAGTG CAGGGTGTTT
GCCGAGACCG AGATGCCCAG TGTCGAATCC GAGATCACCG ACCCCGACCG GTTGCAGGCT
TTGTACGCCA CCGGGCTGCT CGACTCACCT CCGGACGAGG CGTACGACCG CATCACCCGG
GCGGCGGCCG CCGCGCTGGA CGCCCCGTCG GCCGCCATGT CACTGATCGA CGTCGACCGG
CAATTCTTCA AGAGTTCGGT GGGTATGGGC GACGACGAAC GGCAGACGCC ACTCGATCGG
TCCGTCTGCC AATATGCGGT GGCAAACGGC TCCGCACTGG TACTCGAAGA CGCCAGGACC
GATCCGGTGT TCAGGAATCA TCCTGCGGTC CGCGACGGCA CCATGGTCGC CTATCTCGGC
ATCCCGTTGA CCGACAAAGA CGACAACGCG GTCGGAACGC TGTGCGTATT CGATGTCAAA
CCGAGACTCT GGGGTACCGG TCACGTCCGT ATTCTCAGCG ATCTCGCACA ACTCGCCGCC
GAGAAGATGT TCGGCTCACG CGCCGGACAG CAGTAG
 
Protein sequence
MTGFDEWLNR LLEDCARDAG EDVVSYVARA VASQMVADLR RTERASIDEL MAHLNECRVF 
AETEMPSVES EITDPDRLQA LYATGLLDSP PDEAYDRITR AAAAALDAPS AAMSLIDVDR
QFFKSSVGMG DDERQTPLDR SVCQYAVANG SALVLEDART DPVFRNHPAV RDGTMVAYLG
IPLTDKDDNA VGTLCVFDVK PRLWGTGHVR ILSDLAQLAA EKMFGSRAGQ Q