| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_3521 |
|---|
| Symbol | |
|---|
| ID | 4879232 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | - |
|---|
| Start bp | 3710914 |
|---|
| End bp | 3712617 |
|---|
| Gene Length | 1704 bp |
|---|
| Protein Length | 567 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640140825 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001071789 |
|---|
| Protein GI | 126436098 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2308] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.26297 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCCCCG CTAACCTGCC TGAACGCCCG GTGTGGGGCA AAGTGTCATG GGTGAGCCTG
CGCACCCTGC CGACCGAATC CAGCCGATCC TCCCGTACCA ACGGTGCGCG GACCAAAAGG
CACGAAGGAA TCTTCGACGG CTACAACAGC GTCGGCGGCT ACGACAAGGC CTTCGACGAG
ATGTTCGACC CCCAGGGCAA CGTGCGCGGG CCCTACAAGG GCATCTTCGC CGAACTCGAG
CCGGCGGACG CCTCCGACCT CCAGGCGCGC GCCGATGCGC TGGACCGGGC GTTCATCAAC
CAGGGCATCA CGTTCTCGCT GTCCGGCCAG GAGCGGCCGC TGCCGCTGGA CCTCGTGCCG
CGGGTGATCT CCGCCGCCGA GTGGACGCGG TTGGAGCGCG GCATCACGCA GCGGGTGCGG
GCACTCGAGG CCTATCTCGA CGACATCTAC GGCGAACAGC ACATCCTGCG CGACGGCGTC
ATCCCGCGTC GGCTGGTCAC GTCCTGTGAG CACTTCCACC GCGAGGCGGT GGGCATCAGC
CCGCCCAACG GTGTGCGCAT CCACGTCGCG GGCATCGACC TGATCCGTGA CGAACACGGC
AGCTTCCGGG TCCTCGAGGA CAACCTGCGG TCCCCGTCCG GGGTGTCCTA TGTGATGGAG
AACCGCCGCA CCATGGCGCG GGTGTTCCCC AACCTGTTCG CCACCCACCG GGTGCGCGCG
GTCGACGACT ACGCCTCGCA CCTGTTGCGG GCCCTGCGCA ACGCGGCCGC CTCCAACGAG
GCCGACCCGA CGGTCGTCGT GCTGACACCG GGGGTCTACA ACTCGGCGTA CTTCGAGCAC
TCACTGCTCG CCCGGCAGAT GGGCGTGGAG CTGGTCGAGG GGCGCGACCT GTTCTGCCGC
GACAACACGG TCTACATGCG CACCACCGCC GGTGAGCGCC AGGTCGACGT CATCTACCGC
CGCATCGACG ACGCGTTCCT CGACCCGATG CAGTTCCGCC CCGATTCGGT GCTCGGGGTG
GCCGGGCTGC TCAACGCCGC CCGGGCCGGC AACGTCGTCA TCTCCAGCGC CGTCGGCAAC
GGCGTCGGCG ACGACAAGCT CGTGTACACC TACGTGCCGA CGATCATCGA GTACTACCTG
GGCGAGAAGC CGCTCCTGGC GAACGTCGAC ACCTACCGCT GCTGGCTCGA CGAGGAACGC
GAAGAGGTGC TCGACCGGGT CACCGAACTG GTGATCAAAC CCGTCGAGGG CTCCGGCGGG
TACGGCATCG TGTTCGGTCC GGATGCATCG GACAAGGAGC TCAACACCAT CTGCAAGAAG
ATCCGCAACG ACCCCCGCGG GTGGATCGCC CAGCCGGTGA TGCAGCTGTC GACCGTACCG
ACCCAGATCG GCGGCAAGCT GGCGCCCCGA CACGTCGACC TGCGCCCGTT CGCGGTCAAC
GACGGTGACG ATGTGTGGGT GCTGCCCGGC GGACTCACCC GCGTCGCACT GCCGGAGGGG
TCGCTGGTGG TCAACTCCAG CCAGGGCGGC GGGTCGAAGG ACACCTGGGT GCTGGCCTCG
CGTGCGTCGG CCGCCGACCG GGAGCTGGCC GCCGCGGAGG TGGTGCGCTC GCTGCCCAAG
TCGGCGAAGG CCAACAAGGT GGACAAGAAT GCGGATGCCC AGTCCGCAGA ACAGCTGCAG
CAGCAGCAAC AGCAGCAGCA GTAG
|
|---|
| Protein sequence | MSPANLPERP VWGKVSWVSL RTLPTESSRS SRTNGARTKR HEGIFDGYNS VGGYDKAFDE
MFDPQGNVRG PYKGIFAELE PADASDLQAR ADALDRAFIN QGITFSLSGQ ERPLPLDLVP
RVISAAEWTR LERGITQRVR ALEAYLDDIY GEQHILRDGV IPRRLVTSCE HFHREAVGIS
PPNGVRIHVA GIDLIRDEHG SFRVLEDNLR SPSGVSYVME NRRTMARVFP NLFATHRVRA
VDDYASHLLR ALRNAAASNE ADPTVVVLTP GVYNSAYFEH SLLARQMGVE LVEGRDLFCR
DNTVYMRTTA GERQVDVIYR RIDDAFLDPM QFRPDSVLGV AGLLNAARAG NVVISSAVGN
GVGDDKLVYT YVPTIIEYYL GEKPLLANVD TYRCWLDEER EEVLDRVTEL VIKPVEGSGG
YGIVFGPDAS DKELNTICKK IRNDPRGWIA QPVMQLSTVP TQIGGKLAPR HVDLRPFAVN
DGDDVWVLPG GLTRVALPEG SLVVNSSQGG GSKDTWVLAS RASAADRELA AAEVVRSLPK
SAKANKVDKN ADAQSAEQLQ QQQQQQQ
|
|---|
| |