Gene Mjls_3045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_3045 
Symbol 
ID4878758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp3179655 
End bp3181436 
Gene Length1782 bp 
Protein Length593 aa 
Translation table11 
GC content74% 
IMG OID640140345 
Producthypothetical protein 
Protein accessionYP_001071315 
Protein GI126435624 
COG category[S] Function unknown 
COG ID[COG5373] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.185141 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.289223 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAT CCCCCCATGC CGTCATCGCC CGGCTGTCGG CCGACTTCGC GGCGATCTCC 
CGGCAGCTCG CCCGGGTGTC GTCGGATCTG ACGGAGTTGG ACCGGCTACT CGCCGGCCGG
TCGCCCGCAC CACAACCCGC CCCGCAGCCC GCGCCGCAAC CGTTCTACCT GCCGCCCCCG
CCACCGCCGC CACGGCCCGT CGTGCCGCCG CCTCCGCCAC CGGCGCCGAG GGTGCCCCGC
GAACGCTCGG AGGGGTGGAT CGGCAAGGTG CTGGCGGTTG CCGGCGTGGC CGTGACACTC
ATCGGTGTGG TGCTGCTCCT GGTGCTCGCG GCCCAGGCGG GCATCCTGCG CCCGGAGATC
CGTGTCGGCG CCGGCGCACT GCTCGCGGCG GCGCTGGTGG CCGTCGGCTG CCGGATCAAC
AGCAGGGACG GCGGTCGGGT GGGCGGTATC GCCCTGGCGG CCACCGGGAT CGCCGCCGCG
TATTTCGACG TCCTCGCCGT CACCACGATC TACGAGTGGA TCGCCGCGCC CGTCGGCCTG
GTGCTCGCCG CGGCCGTCGG CGGGGGCGGT CTCACGCTGG CCCGCCGGTG GGACTCCGAG
CATCTCGGGC TGCTGGTGCT GGTGCCGCTG ATCGCGCTGG CCCCGGTGCT CACCGAGGGC
GTGACGCTGT TGCTGGTCTC GTTCATGCTC GCGCTGTCGG CCGCGACGCT TCCGGTGCAG
CTCGGCAAGG ACTGGCTGTG GTTGCACGCC GCGCGCACGG CGGCGGTGAC GCTGCCGCTG
TTGGCGGCGC TCGCCGGGGC GGCGTTCGAC GGCGACCACG ATCTGCTGCT GGCCGGAGCC
TGCGGTGTCG CGGCGCTGCT CTCGCTGGCC GGCGCCCTGC TGGTGCTGCC CCAGACGACT
CGACGCGCGG CCATGGCGCT GCTCACCGCG TCGGGTGTGG CGCCGGTGCT GTGCGTCTCG
GCGACCGCGG ACCGCGTGGT GGCATCGCTG ATGATCGCCG CGCTGGCCGC GGCGCTGCTG
GCGATCGTGT TGAGCGGGCA GTGGCTGCCC GCGGTGTCCG GCGTCGTCCG CCAGATCTGG
TCGGCGCTGT CGGCGGTCAG CGCGCTGATC GCGGTCACCG TCGCGTTCGA CGGAGAGGTC
GCCGCCCCGC TGTTGCTGGC GATGGCGGCC GTGGTCGCCG TGGCCGGTCG CCACGACGAT
GTCGCGCGGT GGTCGGCGCT CGGGTTCGCG GTGTTCGGCG GCGGGCTGTA CATCGCCTAC
GCACCGCCGA GCATGCTGCT GCGCGCGGTG GCGATCAGTG GCCCCGACGC GGTGGCCGTC
CTCGTCTCCA GCCTGCTGTC GATCGCGGCG GCGGGGGCGA TCGCCCGGAG TTGGAGCGGC
GGGACCGGCC TCGGCGACGA CACCGTCCGC GCGCTGTGGG CCGGTGCGGC AGCGGTCGCC
ACCTACGCGG TGACGGTGTT CAGCGTGACC GCCGGTGTGA TGATCGGCGG CACCGGGGGC
GGGTTCTTCG GCGGGCACGT GGCGGCGACG GTGTGTTGGA TCGGCGCCGC GGCGGCCCTG
TTCGGCTACG CCGCCCGGCG GCCGAAAGCG GAGCGGACTC CGTTCCTCGG CGCCGGGCTG
GCACTGGTCA GCGCCGCCAT GGCGAAGTTG TTCCTGTTCG ATCTGGGCAC TCTGGACGGG
ATCTTCCGGG TGACGGTGTT CCTCGTGGCC GGACTCATCC TGCTCGGTAT CGGCGCCGGC
TACGCCCGCC TGCTGGCCGT CCAGGACCGC CGCCCGGTGT GA
 
Protein sequence
MTESPHAVIA RLSADFAAIS RQLARVSSDL TELDRLLAGR SPAPQPAPQP APQPFYLPPP 
PPPPRPVVPP PPPPAPRVPR ERSEGWIGKV LAVAGVAVTL IGVVLLLVLA AQAGILRPEI
RVGAGALLAA ALVAVGCRIN SRDGGRVGGI ALAATGIAAA YFDVLAVTTI YEWIAAPVGL
VLAAAVGGGG LTLARRWDSE HLGLLVLVPL IALAPVLTEG VTLLLVSFML ALSAATLPVQ
LGKDWLWLHA ARTAAVTLPL LAALAGAAFD GDHDLLLAGA CGVAALLSLA GALLVLPQTT
RRAAMALLTA SGVAPVLCVS ATADRVVASL MIAALAAALL AIVLSGQWLP AVSGVVRQIW
SALSAVSALI AVTVAFDGEV AAPLLLAMAA VVAVAGRHDD VARWSALGFA VFGGGLYIAY
APPSMLLRAV AISGPDAVAV LVSSLLSIAA AGAIARSWSG GTGLGDDTVR ALWAGAAAVA
TYAVTVFSVT AGVMIGGTGG GFFGGHVAAT VCWIGAAAAL FGYAARRPKA ERTPFLGAGL
ALVSAAMAKL FLFDLGTLDG IFRVTVFLVA GLILLGIGAG YARLLAVQDR RPV