Gene Mjls_2597 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_2597 
Symbol 
ID4878313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp2723485 
End bp2724606 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content69% 
IMG OID640139894 
ProductABC transporter related 
Protein accessionYP_001070870 
Protein GI126435179 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.236865 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.853595 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACGG TATCTGTCGC CGATCTGCAC AAATCCTTCG GCAAGACGCG AGCCGTCGAC 
GGCGTGACCG TCGACATCGC CAACGGCGAG TTCTTCGTGA TCCTCGGGCC CAGCGGGGCG
GGCAAGACCA CCACGCTGAA ATCGATCGCG GGGCTGGTCG ACATCGACGG CGGGACGGTG
CACATCGGGG GCCGCGACGT CACCCACGTC GAGCCCTACC ACCGCAATGT CGCGATGGCG
TTCGAGAGCT ACGCGCTGTA CCCGCAGAAG ACGGTCAGCG AGAACCTCGC CTCCCCGCTG
AAATCCGGTC GCACCGGGCG CTATTCCGAG GCCGAGCGCA CCGAGCGGAT CGACCAGGTG
ACGACCACGC TGGGGATCAA CCACCTGCTG AAGCGCTATC CCCGGGAGCT GTCGAACGGT
CAGCGGCAGC GGGTGGCCCT GGGCCGGGTG CTGGTGCGCC CCGCCGACAT CTACCTGCTC
GACGAACCGC TCAGCCACCT CGACGCGAAG CTGCGCGCCG CGATGCGCGC CGAGCTCAAG
CAGCTCGGGG CGATGTCGAA CACCACGACG CTCTATGTCA CGCACGACTA CCAGGAGGCG
CTGGCGCTGG GCGACCGGAT CGCGGTGATG CGTGAGGGCC GCCTGGTGCA GATCGGCACA
CCCGAGGACA TCTGGCGCCG GCCCGCCGAC ACCTTCGTCG CGCGGGCGCT CGGCCAGCCC
GAGATCAACC TGCTCGACGG GGTGGTCGAC GACGACCGGA TCCGGCTCGG AGACGGCTCG
CTGGACGTGG CCATCCCGGC CGGCGCCGTC GCCGACCGCG GTGACCGCGT ACGGGTCGGT
CTGCGGCCCA GCGACATCCA CGTCACCGAC GGCGAAGGAA CGCTGCGGGG CCGGGTGCTG
CTCGCCGAGC GCCTCGGCCG CAACATCGAG TTGACCGTCG ACTGCGGCGG CACCCAGCTC
ATCGTGTTGA CCTCCGGGCG CCACGGGGTC GGGGAAGGCG ACAACGTCAC GATGAGGGTT
GCCGACTCCG ACGTCCACGT CTTCGCCGTC GGCGACGGCG ACGGCGACAC CCCTCGACTG
GGACCTGCCG ATCACACATC GACATTGGAG GCAGCACAGT GA
 
Protein sequence
MATVSVADLH KSFGKTRAVD GVTVDIANGE FFVILGPSGA GKTTTLKSIA GLVDIDGGTV 
HIGGRDVTHV EPYHRNVAMA FESYALYPQK TVSENLASPL KSGRTGRYSE AERTERIDQV
TTTLGINHLL KRYPRELSNG QRQRVALGRV LVRPADIYLL DEPLSHLDAK LRAAMRAELK
QLGAMSNTTT LYVTHDYQEA LALGDRIAVM REGRLVQIGT PEDIWRRPAD TFVARALGQP
EINLLDGVVD DDRIRLGDGS LDVAIPAGAV ADRGDRVRVG LRPSDIHVTD GEGTLRGRVL
LAERLGRNIE LTVDCGGTQL IVLTSGRHGV GEGDNVTMRV ADSDVHVFAV GDGDGDTPRL
GPADHTSTLE AAQ