Gene Mjls_2529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_2529 
Symbol 
ID4878247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp2650276 
End bp2650929 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content68% 
IMG OID640139828 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001070804 
Protein GI126435113 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1174] ABC-type proline/glycine betaine transport systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.194108 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTCGTGC GGGAGCTGTG GGACTACCTC AGAACCCATC AGGCTCAGCT GATCTTCGAC 
TCCTACCAGC ACGTCAGCGC GGTGGTGCAG AGCGTGCTCA TCGCGGCCGT GGTCGGCGTC
GCGATCGGGG TGCTGACCTA CCGCAACGCC ACCGCGGCCA ACCTCGCCAC CGCGACGTCG
AGTGTGATCC TCACCGTGCC GGCGTTCGCG CTGCTGGGTC TGCTGATCCC GCTCTTCGGG
CTCGGCGTGG TGCCCAGCGT GGCGGCGCTG GTCCTGTACT CGCTGTTGCC GATCATCCGC
AACACGATCG TCGGGCTCAA CGCCGTCGAT CCCGCGCTGA CCGACGCGGC GCGGGGGATC
GGCATGAGCC GACTGGCCAC GCTCGGCCGT GTCGAACTGC GGCTGGTGTG GCCGTCGATC
CTGTCGGCCA TGCGGATCAG CACCCAGATG TCGATGGGGG TGCTGGCCAT CGCCGCCTAC
GTCAAAGGCC CAGGACTCGG GAACCTGATC TTCGCCGGGC TCGCCCGCGT CGGCAGCCCC
ACCGCCGTCC CCATGGCGCT GACCGGAACC CTGCTGATCG TCATCCTCGC CCTCGTCCTC
GACGCGGTGC TGGTGCTGAT CGGGCGGCTC ACCACATCGA AAGGCATTCG ATGA
 
Protein sequence
MVVRELWDYL RTHQAQLIFD SYQHVSAVVQ SVLIAAVVGV AIGVLTYRNA TAANLATATS 
SVILTVPAFA LLGLLIPLFG LGVVPSVAAL VLYSLLPIIR NTIVGLNAVD PALTDAARGI
GMSRLATLGR VELRLVWPSI LSAMRISTQM SMGVLAIAAY VKGPGLGNLI FAGLARVGSP
TAVPMALTGT LLIVILALVL DAVLVLIGRL TTSKGIR