Gene Mjls_2407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_2407 
Symbol 
ID4878125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp2513850 
End bp2515013 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content69% 
IMG OID640139706 
Productcarbamoyl phosphate synthase small subunit 
Protein accessionYP_001070682 
Protein GI126434991 
COG category[E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism 
COG ID[COG0505] Carbamoylphosphate synthase small subunit 
TIGRFAM ID[TIGR01368] carbamoyl-phosphate synthase, small subunit 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.263156 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCAACA CGAGCGAGAC GCGAAGCGGA TCGCGCATCG ATGGGGCCGT GGCCCTTCTC 
GTCCTGGAGG ACGGGCGGGT CTTCACCGGG GTGCCCTACG GCGCCGTCGG GCAGACACTC
GGTGAGGCGG TGTTCTCGAC CGGGATGTCG GGATACCAGG AGACTCTCAC CGACCCCAGT
TACTACGGCC AGATCGTGGT CGCGACCGCA CCGCAGATCG GCAACACGGG CTGGAACCAC
GAAGACGCCG AGAGCCGCGA CGACAGGATC TGGGTAGCCG GCTACGCCGT CCGCGACCCG
TCGCCGCGCG CCTCGAACTG GCGCGCCACC GGCACCCTCG ACGAGGAACT GGTCCGCCAG
GGCGTCGTCG GCATCGCCGG TATCGACACC CGCGCGCTGG TGCGCCATCT GCGCACCCGC
GGCGCCATGA AGGCGGGCAT CTTCAGCGGC GACGAGTCCG CCGCACCGAT GTCGGAACTG
CTCGAACGCG TCCGCAGCCA ACCGGGCATG CTCGGCGCGA GCCTGGCGGA CAAGGTCAGC
ACCGACGATG TCTACATCGT GGAACCCGAG GGGGCCCACC GGTTCACCGT CGCGGCGATC
GACCTCGGCA TCAAGACCAA CACCCCGCGC AACTTCGCGC GGCGCGGCAT CCGCAGCCAT
GTGCTGCCCG CCCGGGCCAC CTTCGAGCAG ATCGCCGACC TCAAACCCGA CGGGGTGTTC
CTGTCCAACG GGCCGGGCGA TCCGGCGGTG GCCGACCATG TCGTCGAGGT CACCCGGGAG
GTGCTGGGCG CCGGCATCCC GCTGTTCGGC ATCTGCTTCG GCAACCAGAT CCTCGGCCGG
GCTCTGGGCC GGGGCACCTA CAAGATGGTG TTCGGTCACC GCGGCATCAA CGTGCCGGTG
ATGGACCACG CAACCGGTCG CGTCGCGATC ACCGCGCAGA ACCACGGTTT CGCGCTCGAA
GGCGAAGCGG GTGAACGTTT CGACACCCCG TTCGGGGCGG CCGTCGTCAG CCACACCTGC
GCCAACGACG GGGTCGTCGA AGGCGTCAAA CTCGTCAACG GGCGGGCCTT CTCGGTGCAG
TACCACCCGG AGGCCGCGGC CGGCCCGCAC GATGCGAACT ATCTGTTCGA CCAGTTCGTC
GACCAGATGT CGGAGGAGAA GTAA
 
Protein sequence
MSNTSETRSG SRIDGAVALL VLEDGRVFTG VPYGAVGQTL GEAVFSTGMS GYQETLTDPS 
YYGQIVVATA PQIGNTGWNH EDAESRDDRI WVAGYAVRDP SPRASNWRAT GTLDEELVRQ
GVVGIAGIDT RALVRHLRTR GAMKAGIFSG DESAAPMSEL LERVRSQPGM LGASLADKVS
TDDVYIVEPE GAHRFTVAAI DLGIKTNTPR NFARRGIRSH VLPARATFEQ IADLKPDGVF
LSNGPGDPAV ADHVVEVTRE VLGAGIPLFG ICFGNQILGR ALGRGTYKMV FGHRGINVPV
MDHATGRVAI TAQNHGFALE GEAGERFDTP FGAAVVSHTC ANDGVVEGVK LVNGRAFSVQ
YHPEAAAGPH DANYLFDQFV DQMSEEK