Gene Mjls_2140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_2140 
Symbol 
ID4877860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp2238906 
End bp2239784 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content67% 
IMG OID640139437 
Productpolar amino acid ABC transporter, inner membrane subunit 
Protein accessionYP_001070417 
Protein GI126434726 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0028843 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCGGCA CCGTCCTGTT CGACGCGCCC GGGCCGCGCG CCCGGCGACG CAACGTCGTC 
ATCACGCTCA TCACGTTGGC GATCACCGCG CTGATCGTCT GGGTGGTGTA CTCGCGGCTC
GACGCGAAAG GTCAGCTCAC CGCGGCGAAG TGGGAGCCGT TCCTGACGCC GAACCTGTGG
ACCACCTACG TGCTGCCCGG CGTGCAGGGC ACGTTGACCG CGGCGGCGGT GTCGATCGTG
CTGGCGTTGA TCCTGGGATT CGGGCTCGGA GTCGGCAGGC TGTCGGTGAT CACCCCGATC
CGCTGGGTGT GCGCGGTGAT CGTGGAGTTC TTCCGCGCGG TCCCGGTGCT GATCATGATG
ATCTTCGCGT ACTTCCTGTA CGCGTTCTAC GACGTCTTCC CCTCCAAACA CCTTGCGCTG
GCCGGCGTCA TCACCGGCCT CACGCTCTAC AACGGCGCGG TGATCGCCGA GATCGTCCGG
GCCGGGGTGA AGGCGTTGCC GCGCGGTCAG GCCGAGGCCG CCTCGGCGCT GGGCCTGCGC
TGGGGGCAGA CCCAGCGCTC GATCCTGCTG CCGCAGGCTG TCACATCGAT GTTGCCGGTC
CTGGTGTCCC AACTCGTGGT GGTCCTGAAG GACACCGCGA TCGGCTACCA GATCACGTTC
GTCGAGATGG TGCGTCAGGG CACCGTCGTC GGCTCGTCCT ACGGCAACTA CATCCCCGCC
CTCATGGTCA TCGCCGTGTT GATGATCAGC GTGAACTTCG CGTTGTCCGC CCTGGCGACC
AAACTCGAAC GCCGGATGCG GCGGTCGCGG CGCGGACCGG CGCCGCTGGA CACCGAGGCC
ATCGAGCAGG AAGGCGCGCC GGGCGCGAAG GTGGTGTAG
 
Protein sequence
MSGTVLFDAP GPRARRRNVV ITLITLAITA LIVWVVYSRL DAKGQLTAAK WEPFLTPNLW 
TTYVLPGVQG TLTAAAVSIV LALILGFGLG VGRLSVITPI RWVCAVIVEF FRAVPVLIMM
IFAYFLYAFY DVFPSKHLAL AGVITGLTLY NGAVIAEIVR AGVKALPRGQ AEAASALGLR
WGQTQRSILL PQAVTSMLPV LVSQLVVVLK DTAIGYQITF VEMVRQGTVV GSSYGNYIPA
LMVIAVLMIS VNFALSALAT KLERRMRRSR RGPAPLDTEA IEQEGAPGAK VV