| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_2113 |
|---|
| Symbol | |
|---|
| ID | 4877833 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | + |
|---|
| Start bp | 2217266 |
|---|
| End bp | 2218084 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640139410 |
|---|
| Product | phage shock protein A, PspA |
|---|
| Protein accession | YP_001070390 |
|---|
| Protein GI | 126434699 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0465583 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAACC CGTTCGTCAA GGCGTGGAAG TACCTGATGG CGCTGTTCAG CTCGAAGGTC
GACGAGTACG CCGACCCGAA GGTGCAGATC CAGCAGGCGA TCGAAGAGGC GCAGCGCCAG
CACCAGGCGC TGACCCAGCA GGCCGCCCAG GTCATCGGCA ACCAGCGCCA GCTGGAGATG
AGGCTGAACC GCCAGCTCGC CGACATCGAG AAGCTGCAGG TCAACGTCCG CCAGGCGCTG
ACGCTGGCCG ATCAGGCCGT GGCGAACGGT GACGCCGCCA AGGCCACCGA GTACAACAAC
GCCGCCGAGG CGTTCGCCGC CCAGCTGGTG ACGGCCGAAC AGAGCGTCGA GGACCTCAAG
GCGCTGCACG ATCAGGCGCT GCAGGCCGCC GGCCAGGCCA AGAAGGCCGT TGAGCAGAAC
GCGATGATGC TGCAGCAGAA GATCGCCGAG CGCACCAAGC TGCTCAGCCA GCTCGAGCAG
GCCAAGATGC AGGAGCAGGT CAGCTCCTCG CTGCGGTCGA TGAGCGAACT GGCGGCGCCG
GGAACCACAC CCAGCCTCGA CGAGGTGCGC CAGAAGATCG AGCGGCGTTA CGCCAACGCG
ATGGGTGAGG CCGAGCTCGC GCAGAACTCC GTGCAGGGCC GCATGCTCGA GGTCCAGCAG
GCCAGCGTGC AGATGGCCGG CCATTCGCGG CTGGAGCAGA TCCGCGCGTC GATGCGGGGT
GAGGCACTGC CGTCCGGTGG CGCCACCCCG GCGGCCAGCC CCGCCACCCC GGCCGCAAAT
CCGGCTCAGC AGGCGCCGGA AAACCCGTTG TCACAGTAG
|
|---|
| Protein sequence | MANPFVKAWK YLMALFSSKV DEYADPKVQI QQAIEEAQRQ HQALTQQAAQ VIGNQRQLEM
RLNRQLADIE KLQVNVRQAL TLADQAVANG DAAKATEYNN AAEAFAAQLV TAEQSVEDLK
ALHDQALQAA GQAKKAVEQN AMMLQQKIAE RTKLLSQLEQ AKMQEQVSSS LRSMSELAAP
GTTPSLDEVR QKIERRYANA MGEAELAQNS VQGRMLEVQQ ASVQMAGHSR LEQIRASMRG
EALPSGGATP AASPATPAAN PAQQAPENPL SQ
|
|---|
| |