Gene Mjls_1902 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_1902 
SymbolleuD 
ID4877624 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp2007838 
End bp2008431 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content62% 
IMG OID640139201 
Productisopropylmalate isomerase small subunit 
Protein accessionYP_001070181 
Protein GI126434490 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0066] 3-isopropylmalate dehydratase small subunit 
TIGRFAM ID[TIGR00171] 3-isopropylmalate dehydratase, small subunit 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.37729 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGCCT TTCGCACCCA CACCGGGATC GGCGTACCCC TGCGTCGGTC CAACGTCGAC 
ACCGACCAGA TCATCCCCGC GGTGTACCTG AAGCGGGTCA CCAGAACCGG TTTCGAGGAC
GGCCTGTTCG CCGCGTGGCG CAACGACCCC TCCTTCGTGC TCAACCTGCC GCCTTTCGAC
CGCGGTTCGG TTCTGGTCGC CGGACCGGAT TTCGGCACGG GGTCCTCCCG CGAGCACGCG
GTCTGGGCGC TGATGGACTA CGGCTTCCGG GTCGTCATCT CGTCCCGGTT CGCCGATATC
TTCCGCGGGA ATGCGGGTAA GGCGGGCCTG TTGGCCGCCG AGGTGAATCA AAATGATGTT
GAACTTATCT GGAAGCTCAT CGAGCAGAAT CCGGGCTTGG AAATCACTGT CAATCTTCAA
GATCGGAACA TCATCGCGGG AACGGTCATG GTGCCGTTCA CTATTGACGA TTACACCGCG
TGGCGACTGC TCGAGGGGCT CGACGATATA GGCCTTACGC TGCGGAAACA GTCCGAGATC
GAGGATTACG AGCGGCGCAG GCCGAGCTGG AAACCGCGCA CCCTGCCGGT CTGA
 
Protein sequence
MEAFRTHTGI GVPLRRSNVD TDQIIPAVYL KRVTRTGFED GLFAAWRNDP SFVLNLPPFD 
RGSVLVAGPD FGTGSSREHA VWALMDYGFR VVISSRFADI FRGNAGKAGL LAAEVNQNDV
ELIWKLIEQN PGLEITVNLQ DRNIIAGTVM VPFTIDDYTA WRLLEGLDDI GLTLRKQSEI
EDYERRRPSW KPRTLPV