Gene Mjls_1548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_1548 
Symbol 
ID4877280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp1656603 
End bp1657298 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content70% 
IMG OID640138853 
ProductNADH dehydrogenase subunit C 
Protein accessionYP_001069837 
Protein GI126434146 
COG category[C] Energy production and conversion 
COG ID[COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit 
TIGRFAM ID[TIGR01961] NADH (or F420H2) dehydrogenase, subunit C 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.559128 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.208156 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGAGG CGAACGGCAC CACCGGGGGC GGCGCGGGCG ATCCGGAAGT CATCGACGTG 
CGCCGAGGGA TGTTCGGGGC CAAGGGTTCT GGCGACACGT CGGGTTACGG CAGGCTGATC
CGGTCGGTGG CGCTGCCCGG CGGTTCACCG CGGCCGTACG GCGGCCACTT CGACGAGGTC
GTCGACGCGC TGGCGGCCGC GCTGGGCCAA GACCTGTACG ACGCATCGGT CGAACGCATC
GTCGTCTACC GCGACGAACT GACGCTCGAG ATCGCCCGGG CCCGACTGCC CGTCGTCGCC
AAGACCCTGC GTGACGACGC GGCCCTGCGG TTCGAACTGT GCCTCGGGGT CAGCGGCGTG
CACTACCCGG GCGACGCCGG GCGCGAACTG CACGCCGCGT ACCCGCTGAT GTCGATCACC
CACAACCGGC GGATCCGGCT GGAAGTGGCC GCCCCCGACG ACGATCCGCA CATCCCGTCG
CTGTTCTCGG TGTACCCCAC CACCGACTGG CACGAGCGGG AGACCTACGA CTTCTTCGGG
ATCATCTTCG ACGGCCATCC GTCGCTCACC CGGATCGAGA TGCCCGACGA CTGGGTCGGG
CATCCACAGC GCAAGGACTA CCCGCTGGGC GGCATCCCCG TCGAGTACCA CGGCGCCCGG
ATACCACCGC CCGACGAGCG GAGGGCCTAC AACTGA
 
Protein sequence
MTEANGTTGG GAGDPEVIDV RRGMFGAKGS GDTSGYGRLI RSVALPGGSP RPYGGHFDEV 
VDALAAALGQ DLYDASVERI VVYRDELTLE IARARLPVVA KTLRDDAALR FELCLGVSGV
HYPGDAGREL HAAYPLMSIT HNRRIRLEVA APDDDPHIPS LFSVYPTTDW HERETYDFFG
IIFDGHPSLT RIEMPDDWVG HPQRKDYPLG GIPVEYHGAR IPPPDERRAY N