Gene Mjls_1402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_1402 
Symbol 
ID4877138 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp1503048 
End bp1503839 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content70% 
IMG OID640138710 
Product3-oxoacid CoA-transferase, A subunit 
Protein accessionYP_001069695 
Protein GI126434004 
COG category[I] Lipid transport and metabolism 
COG ID[COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit 
TIGRFAM ID[TIGR02429] 3-oxoacid CoA-transferase, A subunit 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.893267 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAGTCG ACAAAGTCGT CGGTTCGGCC CGTGATGCGG TCGCCGACAT CCCGGCGGGC 
GCGAGCCTGG CCGTCGGTGG GTTCGGCCTC GCCGGTATCC CGTGGTTCCT CATCGAGGCG
CTACTCGACC AGGGCGCCGA CGATCTGACC ATCGTCTCCA ACAACTGCGG GGTGGACGGC
GCCGGACTCG GTCTGCTCCT CGAAGCGGGC CGGATCAGCC GAGTGATCGC CTCGTACGTC
GGGGAGAACA AGGAATTCGG CAGGCAGTAC CTCGCCGGCG AGTTGACCGT CGAACTCACC
CCGCAGGGCA CGCTCGCCGA ACGGCTGCGC GCGGGTGGCA GCGGCCTCGG CGCGTTCTTC
ACTCCGACCG GTGTCGGCAC GCTGGTCGCC GACGGTGGTC TGCCGTGGCG CTACCACCCC
GACGGCAGTG TCGCGCTCGC GTCACCCCCC AAGGAGGTTC GCAGTTTCGC CGGCCGCGAC
ATGGTGCTCG AGGAAGCCAT CGTCACCGAC TACGCGCTGA TCCGCGCCGC CGTCGTCGAC
CGGGCAGGCA ACTGCCGGTT CCACGCCGCG GCCCGCAACT TCAACCCGCC GGCGGCGATG
GCCGGCCGGG TCACCCTCGT CGAGGCGGAA GAGGTCGTCG AGGTGGGCGA ACTGGCTCCC
GACGAGATCC ACCTGCCCGG CATCTTCGTC CAGCGCATCG TGGCGCTCAC CCCGATCCAG
GCGCTGCGCA AGGACATCGA GAAGCGCACC ACCCGGCCCC GTCCGGACGC GACACAGGAG
GCGACGCGAT GA
 
Protein sequence
MTVDKVVGSA RDAVADIPAG ASLAVGGFGL AGIPWFLIEA LLDQGADDLT IVSNNCGVDG 
AGLGLLLEAG RISRVIASYV GENKEFGRQY LAGELTVELT PQGTLAERLR AGGSGLGAFF
TPTGVGTLVA DGGLPWRYHP DGSVALASPP KEVRSFAGRD MVLEEAIVTD YALIRAAVVD
RAGNCRFHAA ARNFNPPAAM AGRVTLVEAE EVVEVGELAP DEIHLPGIFV QRIVALTPIQ
ALRKDIEKRT TRPRPDATQE ATR