| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_1280 |
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| Symbol | |
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| ID | 4877016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium sp. JLS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009077 |
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| Strand | + |
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| Start bp | 1367032 |
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| End bp | 1367802 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640138588 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001069573 |
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| Protein GI | 126433882 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.367673 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.166116 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCGCG CGAAGTTCGA CCGACTCTTC GATCTGACCG GCCGCACCGC CGTCGTCACC
GGCGGCACCC GAGGTATCGG TCTCGCGCTC GCCGAGGGTT TCGCGCTGGC CGGCGCCCGG
GTGGTGGTCG CCAGTCGCAA GCCCGACGCC TACGAACGCG CCGCCGAGCA TCTGCGTGGC
CTCGGCGCAC AGGCCGTCGG CGTCCCCACC CACCTCGGGG ACATCGACTC GCTCGAGTCG
CTGGTCAACC GCACCGTCGA GGAGTTCGGC GGCATCGACA TCCTGGTGAA CAACGCCGCG
AACGCGCTGG CGCAACCGCT GGGGGAGATG ACGCCCGAGG CGTGGACGAA GTCCTACGAC
GTGAACCTGC GCGGCCCGGT GTTCCTCGTA CAGCACGCGC TGCCGCACCT GAAGGCCAGC
GCGCACGCCG CGGTCCTGAA CACGGTGTCG GTGGGCGCGT TCAACTTCGC GCCGAACGTG
TCGATGTACG CCGCGGGCAA GGCGGCACTG CTGTCGTTCA CCCGGTCGAT GGCCGCCGCC
TACGCGCCGT ACGGCATCCG CGTGAACGCG CTGGCACCCG GCCCCGTCGA CACCGACATG
ATGCGCAACA ATTCGCAGGA GGCGATCGAC GCGATGGCCG GCGCCACGCT GATGAACCGG
TTGGCATCAC CGGACGAAAT GGTCGGCGCC GCACTGCTGT TGGTTTCCGA CGCCGGCAGT
TACCTGACCG GTCAGGCGAT CATCGTGGAC GGTGGCGGAA CGCCTCGCTA G
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| Protein sequence | MDRAKFDRLF DLTGRTAVVT GGTRGIGLAL AEGFALAGAR VVVASRKPDA YERAAEHLRG
LGAQAVGVPT HLGDIDSLES LVNRTVEEFG GIDILVNNAA NALAQPLGEM TPEAWTKSYD
VNLRGPVFLV QHALPHLKAS AHAAVLNTVS VGAFNFAPNV SMYAAGKAAL LSFTRSMAAA
YAPYGIRVNA LAPGPVDTDM MRNNSQEAID AMAGATLMNR LASPDEMVGA ALLLVSDAGS
YLTGQAIIVD GGGTPR
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