| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_1011 |
|---|
| Symbol | |
|---|
| ID | 4876752 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | + |
|---|
| Start bp | 1098635 |
|---|
| End bp | 1099273 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640138325 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_001069310 |
|---|
| Protein GI | 126433619 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.632644 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGCTC AACCGGACCC GCGGACGGCG GGCGGTCGGG CGCGGTCTGC CGCCAAGACC
ACCCGGCTGA GCCGCGACTC GATCGTCAAC GCCGCGCTGA CCTTCCTGGA CCGCGAGGGC
TGGGATGCGC TGACCATCAA CGCCCTGGCC ACCCAGCTCG GCACCAAGGG TCCGTCGCTG
TACAACCACG TGCACAGCCT CGACGACCTG CGGCGCACCG TGCGGATGCG GGTGGTCGGC
GACATCATCG GCATGCTCAC CACCGTCGGG CAGGGCCGCA CCCGCGACGA TGCGGTGATG
GCGATGGCCA GCAGCTACCG CAGCTACGCC CACCACCACC CGGGCCGGTA CTCCGCGTTC
ACCCGGATGC CGCTGGGCGG GGACGACCCG GAGTTCACCG ACGCCACCAG GGCGGCGGCC
ACCCCGGTGA TCGAGGTGCT GGCCTCCTAC GGCCTCGACG GCGAGGACGC GTTCTACGCC
GCGCTGGAGT TCTGGTCGGC CATGCACGGG TTCGTGCTCC TGGAGATGAC CGGGGTGATG
AACGGCATCG ACACCGATGC GGTGTTCACC GACATGGTGC TGCGGTTGGC CTCCGGTATG
GAACGCCGCT CCGGCGGCGT GGGCGCTGAC CTGCGCTAA
|
|---|
| Protein sequence | MAAQPDPRTA GGRARSAAKT TRLSRDSIVN AALTFLDREG WDALTINALA TQLGTKGPSL
YNHVHSLDDL RRTVRMRVVG DIIGMLTTVG QGRTRDDAVM AMASSYRSYA HHHPGRYSAF
TRMPLGGDDP EFTDATRAAA TPVIEVLASY GLDGEDAFYA ALEFWSAMHG FVLLEMTGVM
NGIDTDAVFT DMVLRLASGM ERRSGGVGAD LR
|
|---|
| |