Gene Mjls_1003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_1003 
Symbol 
ID4876744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp1092332 
End bp1093987 
Gene Length1656 bp 
Protein Length551 aa 
Translation table11 
GC content71% 
IMG OID640138317 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_001069302 
Protein GI126433611 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.265858 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGTCA ATGTCTCGCT CCTCGCGTCC GCGGGCACGC ACGTCGTCAC CAACCAGGTC 
CCGCTGCTCG AGGACCACAA CCCGGCCGCC TCGCCGGTGC TCACCGAGGC GTTGATCCGC
GAGGGCGGGG AGTGGGGCCT CGACGAGGTC GCCGAACTGG GAGCGCTCTC GGGAAGCGCG
CAGGCCCAGC GGTGGGGTGA GCTCGCCGAC CGGAACCGGC CCGTCCTGCA CACCCACGAC
CGCGTCGGCC ACCGCATCGA CGAGGTCGAG TACGACCCCG CCTACCACTC GCTGATGGCC
GTCGCCGTCG GCCACGGACT GCACGCCGCG CCGTGGGCCG ACGACCGCGC CGGCGCCCAC
GTCGTCCGCG CGGCCAAGAC GTCGGTGTGG ACACCCGAAC CCGGGCACAT CTGCCCGATC
TCGATGACCT ACGCCGTCGT CCCCGCCCTG CGCTTCAACC CCGACCTGGC CGCCGTCTAC
GAACCGCTGC TGACCAGCCG GGTGTACGAC CCGGAACTGA AGGTGCCCGC GACCAAGGCC
GGCATCACCG CGGGCATGTC GATGACCGAG AAGCAGGGCG GCTCCGACGT GCGCGCCGGC
ACCACGCAGG CGGTGCCCAA CGGTGACGGG ACCTACTCGC TGACCGGCCA CAAGTGGTTC
ACCTCCGCGC CGATGTGCGA CATCTTCCTG GTGCTCGCCC AAGCGCCGGG CGGGTTGAGC
TGCTTCTTCC TGCCGCGCAT CCTGCCCGAC GGCACCCGCA ACCGGATGTT GTTGCAGCGC
CTCAAGGACA AGCTCGGTAA CCACGCCAAC GCCTCGAGTG AGGTCGAATA CGACGGGGCG
ACGGCCTGGC TGGTCGGCGA GGAGGGTCGT GGCGTGCCGA CCATCATCGA GATGGTCAAC
CTCACCCGGC TGGACTGCAC ACTGGGTTCG GCGACGAGCA TGCGCAGCGG GCTCACCCGG
GCGATCCACC ACGCGCAGCA CCGCAAGGCG TTCGGCGAGT ACCTGATCGA CCAGCCGCTG
ATGCGCAACG TGCTCGCCGA CCTGGCCGTC GAGGCGGAGG CCGCGACGAT GGTCGCGATG
CGGATGGCCG GCGCCACCGA CCGCGCCGTA CGCGGCGACT CCCGCGAGGC GCTGCTGCGC
CGTATCGGCC TGGCCGCCGC GAAGTACTGG GTGTGCAAAC GCGCCACCCC GCACGCGGCC
GAGGCGATGG AATGCCTGGG CGGCAACGGC TATGTCGAGG ACTCGGGGAT GCCGCGGCTG
TACCGCGAGG CGCCGCTGAT GGGTATCTGG GAGGGGTCCG GCAACGTCAG CGCGCTGGAT
ACGTTGCGCG CCATGGCAAC CCGACCGGAG AGCGTCGAGG TGCTGTTCGA CGAGCTGGCG
CAGTCGGCCG GTCAGGACGC CCGGCTCGAC GCGCATGTCG AGGGGCTGCG CCCGGCGCTC
GACGACCTCG CCACCGTGCA GTACCGGGCG CGCAAGGTGG CCGAGGACAT CTGCCTGGCC
CTGCAGGGTG CGCTGCTGGT GCGGCACGGT CATCCGGCGG TGGCCGAGGC GTTCCTGGCG
ACCCGGTTGG GCGGGCAGTG GGGCGGCGCG TTCGGCACGC TGCCCGTCGG CCTGGACCTC
GCGCCGATCC TCGAGCGCGC GTTGGTGAAG GGGTGA
 
Protein sequence
MAVNVSLLAS AGTHVVTNQV PLLEDHNPAA SPVLTEALIR EGGEWGLDEV AELGALSGSA 
QAQRWGELAD RNRPVLHTHD RVGHRIDEVE YDPAYHSLMA VAVGHGLHAA PWADDRAGAH
VVRAAKTSVW TPEPGHICPI SMTYAVVPAL RFNPDLAAVY EPLLTSRVYD PELKVPATKA
GITAGMSMTE KQGGSDVRAG TTQAVPNGDG TYSLTGHKWF TSAPMCDIFL VLAQAPGGLS
CFFLPRILPD GTRNRMLLQR LKDKLGNHAN ASSEVEYDGA TAWLVGEEGR GVPTIIEMVN
LTRLDCTLGS ATSMRSGLTR AIHHAQHRKA FGEYLIDQPL MRNVLADLAV EAEAATMVAM
RMAGATDRAV RGDSREALLR RIGLAAAKYW VCKRATPHAA EAMECLGGNG YVEDSGMPRL
YREAPLMGIW EGSGNVSALD TLRAMATRPE SVEVLFDELA QSAGQDARLD AHVEGLRPAL
DDLATVQYRA RKVAEDICLA LQGALLVRHG HPAVAEAFLA TRLGGQWGGA FGTLPVGLDL
APILERALVK G