| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_0906 |
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| Symbol | |
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| ID | 4876648 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium sp. JLS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009077 |
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| Strand | - |
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| Start bp | 979151 |
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| End bp | 982498 |
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| Gene Length | 3348 bp |
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| Protein Length | 1115 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640138218 |
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| Product | exodeoxyribonuclease V, beta subunit |
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| Protein accession | YP_001069206 |
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| Protein GI | 126433515 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | [TIGR00609] exodeoxyribonuclease V, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.025647 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGAAAC AAATGTGCGA TCCGCTCCGC TCCTCGCTGG ACTTCGACCT GCTCGGCCCG
CTGCCCGCAC CGCTCACCAC GACGGTGCTG GAGGCCAGTG CGGGCACCGG CAAGACGTTC
GCGCTCGCGG GTCTGGTGAC GCGGTACATC GCCGAGGGGG CAGCGACGCT CGACCAGATG
CTGCTCGTGA CGTTCGGCCG GGCGGCCAGT CAGGAACTGC GGGAGCGGGT GCGCTGTCAG
ATGCTCGACG CGCTGGTCGC CTTCGAGGAC CCGTCGACCG TCGGCGACAA CCAACTCGTC
GCGCACCTGA TCGACGCCCC CGACGACGAA CGGCACCTGC GCAAGCAGCG GCTCAAAGAC
GCGTTGGCCG GTTTCGACGC CGCCACGATC GCCACCACGC ACCAGTTCTG CCAGCTCGTC
CTCAAATCGC TTGGGGTGGC CGGGGATACG GATACCGGTG TGCAGCTCGT GGAGAGCCTC
GACGACCTGA CCGCCGAGAT CGTCGACGAT CTGTACCTCG CCCACTTCGG GCAGCAGCGG
GACGATCCGG TGATGACCCG CGGTCAGGCG CTGGAGCTCG CCCACGAGGT CGTCGGCAAC
GCCGGCACCG AACTGCGGCC GCAGAACCCG CCGCCCGGGA CCGAGTCCGC GGTGCGCGTC
GAGTTCGCCA AGGCGGTGTG CGCCGAACTC GAGCGACGGA AACGCCGGCT CGGCATCCTG
CACTACGACG ATCTGCTGTC CCGGCTGGCC AATGCGCTCA CCGGCGAGGA TTCCCCGGCC
CGCACCCGCA TGCACCGCCG CTGGTCGATC GTGATGGTCG ACGAGTTCCA GGACACCGAT
CCGGTGCAGT GGCAGGTGCT CGATCGGGCG TTCACCGGGC GGTCGACGCT GATCCTGATC
GGCGATCCCA AACAGGCGAT CTACGCGTTC CGCGGCGGCG ACATCGCCAC CTACCTGCAC
GCCGCGAGCA CGGCCGGCCA CCGGCAAACC CTCGGCACGA ACTGGCGCAG CGACGGCGAT
CTGGTCGACC GGCTGCAGGT CGTCTTGCGC GACGCCGAAC TCGGCGACCC CGAGATCGTG
GTGCGCCCCG TCGAGGCCCG GCACAAGGGC CACCGGCTCG CGGGGGCACC GCACAACGAT
CCCTTCCGGC TGCGCATCGT CTCCCGCGAC ACCTTCGGCA TCCGCGGCGA CCGCACCATC
GCAATCGACC GGCTGCGAGC GCACATCAGC GCCGACCTCG CCGCCGACAT CGGCCGGCTG
CTGGCCAGCG GAGCGACGTT CTGCGACAAG AAGATCGAAG CCAAGGACAT CGCGGTGATC
GTCGAGAAAC ACAAGGACGC CCGCGCCTGC TTCGACGCGC TGTCGGTGGC CGGCATCCCC
GCGGTCTACA CCGGGGACTC CGACGTGTTC AACTCCCCCG CGGGTGACGA CTGGCTGTGC
CTGCTCGAGG CGTTCGACCA GCCGCACCGC CCCGGGCTGG TGCGCGCCGC GGCCACCACG
ATGTTCTTCG GCCGCACCGC CGAAGAGCTC GCCGCGCGGG GCGACCGGCT CACCGACGAG
ATCGCCGACC GGCTGCGCGA GTGGGCCGAT CACGCCCGCG AGCGCGGCGT CGCCGCCATC
TTCGAGGCGG CCAACATGAC CGGTATGGGC AGGCGGGTGC TGTCCTGGCG CGACGGGGAG
CGCCACATGA CCGACCTCGC CCACCTGACG CAGGTGCTGC ACGAGACCGC GCACCGCGAA
CACTTCAACC TGCCCGCCCT GCGGGACTGG CTGCGCACCC AACGCGAGGA GCGCAGCGGC
GCCACCGAAC GCAACCGCCG CCTCGACAAC GACGCCGCGG CCGTGCAGAT CATGACGGTC
TGGGTCAGCA AGGGTCTGCA GTATCCGGTC GTGTACCTGC CGTTCGCGTT CAACCGCAAC
ATCCAGACCC GCGACTGCGT GCTGTTCCAC GACGACCGCA CCCGCTGTCT GCACATCGGC
GGCGACGACA GCCCCGACCA CGCACAGGTC GAACGGCTCG GCCGCAAGGA GGCCGCCGGC
GACGACGTGC GCCTCACCTA CGTCGCGCTG ACCCGGGCGC AGTCGCAGGT GGTCGCCTGG
TGGGCGCCGT CGTGGGACGA ACCCAACGGC GGGCTGTCCC GGCTGCTGCG CGGGCGCGCC
CCCGGGGAGA CGACCGTCCC GGACCGCTGC GACCCGCCGA AAGTCGACGA TGCGGACGCC
AGGACGGCGT TGCGCGCCTG GGCGGATCTC GGCGGCCCGG TGCTCGAGGA CTCCGAGATC
GCCGCACCCG CCGCACCCGA GCCCCGCGAA CACCCGACGG ACCTCGACGT GCGGCACTTC
CACCGCGGCA TCGACACCGC GTGGCGGCGC ACGTCGTACT CGGGCCTGCT GCGGGCCGCC
GAGGGCTCGC CGGCCGTCGC CGGGGTGACC AGCGAGCCCG AGGTCGGCGA ACTCGACGAC
GAGGCCGCCG AGGTGCCGGT CAGCGAGAGC CACACCGACG TCGACCCGGT GCCGTCGCCG
ATGGCGGAGC TGCCGACGGG TGCGAAGTTC GGGTCGCTGG TGCACGCGGT GCTCGAACAC
GCCGATCCGT TCGCCGCCGA CCTGAAGGCC GAACTCGAGC ACAGGATCCG CGAACACATG
GTGTGGTGGC CGGTCGACGT CGAGGCCGAG GCGCTGGCCG ACGCGCTGCT GCCGATGCAC
GACACCCCGC TCGGCCCCCT CGTCCCCAAC GTGACACTGC GGCAGATCGG GCTGCGGGAT
CGACTGCGGG AGTTGGACTT CGAGTTCCCG TTGGCCGGCG GCGACGTGCG CGGGGGTGCA
CCGGCGATCA CGCTGGCCGA CGTCGGCCAC CTACTCGGCG CGCACCTGTC CGCCGACGAC
CCGATGGCGC CGTACGTCGA CCGGCTCACC GACCGGGCGC TGGGCGGCCA GTCGCTCAAG
GGGTACCTGA CGGGTTCGAT CGACGTGGTC CTGCGCGTCC GTGACACCAC CGGGGTGCGC
TACGTGGTGG CCGACTGGAA GACGAACTGG CTCGGTGAAC CCGAAAAACC CCTGACCGCC
GCCGATTACA GCCGGACCCG GATGGCCGAA GCGATGCTGC ACTCGGACTA TCCGCTGCAG
GCCCTGCTGT ATTGCGTTGT CCTGCACCGG TTCCTGCGGT GGCGGCAACC GGGTTACGAT
CCGGCGAAGC ATCTCGGCGG GGTGCTGTAC CTGTTCGTGC GCGGGATGTG CGGGGCGTCC
ACACCGGTCA TCGACGGCGA TCCGACCGGG GTTTTCAGCT GGCGGCCGCC CGCTTCGCTG
ATCGTGGCGC TGTCCGATCT GCTCGACGCC GGCGCCGCGG CGGCCTGA
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| Protein sequence | MRKQMCDPLR SSLDFDLLGP LPAPLTTTVL EASAGTGKTF ALAGLVTRYI AEGAATLDQM
LLVTFGRAAS QELRERVRCQ MLDALVAFED PSTVGDNQLV AHLIDAPDDE RHLRKQRLKD
ALAGFDAATI ATTHQFCQLV LKSLGVAGDT DTGVQLVESL DDLTAEIVDD LYLAHFGQQR
DDPVMTRGQA LELAHEVVGN AGTELRPQNP PPGTESAVRV EFAKAVCAEL ERRKRRLGIL
HYDDLLSRLA NALTGEDSPA RTRMHRRWSI VMVDEFQDTD PVQWQVLDRA FTGRSTLILI
GDPKQAIYAF RGGDIATYLH AASTAGHRQT LGTNWRSDGD LVDRLQVVLR DAELGDPEIV
VRPVEARHKG HRLAGAPHND PFRLRIVSRD TFGIRGDRTI AIDRLRAHIS ADLAADIGRL
LASGATFCDK KIEAKDIAVI VEKHKDARAC FDALSVAGIP AVYTGDSDVF NSPAGDDWLC
LLEAFDQPHR PGLVRAAATT MFFGRTAEEL AARGDRLTDE IADRLREWAD HARERGVAAI
FEAANMTGMG RRVLSWRDGE RHMTDLAHLT QVLHETAHRE HFNLPALRDW LRTQREERSG
ATERNRRLDN DAAAVQIMTV WVSKGLQYPV VYLPFAFNRN IQTRDCVLFH DDRTRCLHIG
GDDSPDHAQV ERLGRKEAAG DDVRLTYVAL TRAQSQVVAW WAPSWDEPNG GLSRLLRGRA
PGETTVPDRC DPPKVDDADA RTALRAWADL GGPVLEDSEI AAPAAPEPRE HPTDLDVRHF
HRGIDTAWRR TSYSGLLRAA EGSPAVAGVT SEPEVGELDD EAAEVPVSES HTDVDPVPSP
MAELPTGAKF GSLVHAVLEH ADPFAADLKA ELEHRIREHM VWWPVDVEAE ALADALLPMH
DTPLGPLVPN VTLRQIGLRD RLRELDFEFP LAGGDVRGGA PAITLADVGH LLGAHLSADD
PMAPYVDRLT DRALGGQSLK GYLTGSIDVV LRVRDTTGVR YVVADWKTNW LGEPEKPLTA
ADYSRTRMAE AMLHSDYPLQ ALLYCVVLHR FLRWRQPGYD PAKHLGGVLY LFVRGMCGAS
TPVIDGDPTG VFSWRPPASL IVALSDLLDA GAAAA
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