Gene Mjls_0890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_0890 
Symbol 
ID4876632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp960939 
End bp961808 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content71% 
IMG OID640138202 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001069190 
Protein GI126433499 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0682168 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGAC GCGTCCCGCT GTGGCTGGCG TTGCCCGCCA TCGCCGGGCT GGTGCTGTTC 
CTGGTCTACC CGACGGTGTA CCTGGCGGCG CTGGCGCTCA CCGACTCGTC GCTCGCCCGC
CCGCTGCGCG CGTTCACCGG CGGGGAGAAC TTCGCCAATG CCTTTGCGGC CCCCGCCTTC
ACACCCTCGC TGGTCAAGTC GACGGTGTTC GCGGTGGTGG CGGCCGTGGT GACCACGGTC
CTCGGGTTGG CGATCGCGGT GCTGCTGCGC AGTCGCGGCA CCCGGTTCGG GATCCTCGGC
GCCCTGTTCC TGCTGCCGCT GGTGACCGCG CCCGTGCTGG TCGGGGTGGC GTGGAAGCTG
CTGCTGGCCC CCGTCGGTGG CGGCCTGGCC GGGATCCTCG ACGCGGTCGG GTTGGGTGGG
GCGAACCCGC TGGGCTCCGG GGTGGGTGCG TTCGCCGTCC TGCTGGCGAT CCACATCTGG
CAGTGGACGC CGTTCGCCGT GTTGATCGCG TTCGCCGCGC TCGGCGTCGT CCGGCCCGAA
CTGCTCGAGT CGGCGCGTAT CGACGGCGCC AACCAGTGGC GCACGTTCAC CACTGTCACC
TGGCCGGCCA TCGCCCCGAC GATCTGGGCG GTCACCGTCC TCGAGCTCGT CATCGGCTAC
AAGGTGTTCG ACCTGATCGT CGTCATCACC TCTGGCGGAC CGGGCTTTTC GACCGCGTTG
TCGCCGTACG TCATCTACCA GACCGGCCTG CGGGGCAGCT TCGACATGGG CACCGCCGCC
GCGCAGACGT TGGTGTTCGC GTTCGTGGTC GGCGCTGTCG CGACCGTGGT GACCGGACTG
CGGGCGCGTG CGGTGAAGGC GGACGGATGA
 
Protein sequence
MTRRVPLWLA LPAIAGLVLF LVYPTVYLAA LALTDSSLAR PLRAFTGGEN FANAFAAPAF 
TPSLVKSTVF AVVAAVVTTV LGLAIAVLLR SRGTRFGILG ALFLLPLVTA PVLVGVAWKL
LLAPVGGGLA GILDAVGLGG ANPLGSGVGA FAVLLAIHIW QWTPFAVLIA FAALGVVRPE
LLESARIDGA NQWRTFTTVT WPAIAPTIWA VTVLELVIGY KVFDLIVVIT SGGPGFSTAL
SPYVIYQTGL RGSFDMGTAA AQTLVFAFVV GAVATVVTGL RARAVKADG