Gene Mjls_0874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_0874 
Symbol 
ID4876616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp946116 
End bp947717 
Gene Length1602 bp 
Protein Length533 aa 
Translation table11 
GC content68% 
IMG OID640138186 
Productpolar amino acid ABC transporter, inner membrane subunit 
Protein accessionYP_001069174 
Protein GI126433483 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component
[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.429641 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTGAAGG AGTTCTGGCA TTACTTCACG CTGCCGGAAC TGATCGACGG TGGCCTGCTG 
GCACTGCGGA TCGCGCTGCT GTCGCTGATC ATCGCCTGGC CGGCGGGGCT GCTGCTCGCG
CTGATCAGCG ATTCGCGCTG GTTCCTGCCA CGGTTGGCGG TGGGCGTCTA CATCTGGGTG
CTGCGGGGCA CGCCGATACT GTTGCAGTTG ATCTTCCTCT ACAACGTTCT CCCCCAATGG
GGTTGGCAGC TGTCGTCGGA GACCACCGCC GTCCTCGGGC TCGCGCTCAA CGCAGCGGCG
TTCGCGGCGG AGATCTTCCG CGGCGGACTC AACGCCGTCA ACGTCTCCCA GATCGACGCC
GCCAGGTCGA TCGGCCTGTC ACCGGCGTTG ACGCTGCTGC GCATCCGGCT GCCCCAGGCA
CTGCGGGTGA TCACGCCGGC ACTGGCCAGC GAGGCCATCA TGACGGTCAA GAACACGTCG
CTGGCCTCGG CGATCGCGGT GGCCGAATTG ACGTTGCGCA GCCAGCAGCT GGTGTCGATC
AACTTCGAGT ACCTGCCCGT CTTCGGCGCC GCCGCGGCGA TCTACCTGGC GCTCAACACC
ATCCTCATGG TGGTGCAGTA CCTCAGCGAA CGGCGCCTCG ACAACGACAG ACAGCGGCAC
CGCGGTCCAC TCGCATCGTG GTTGGTTGCC CGCATGCACC TTTCGGCTCC GTCGGCCCGC
GGCGCCGACG AAACTCCGGT GCAGCTGGAT CTGCACGCCC CGGAGTTCCA GACCTACTGG
GACCGGGTCC GCACCGTCGC CGGCCGTGAC ATGACCGAAC AGCCGACCGT GATCAGCGTC
CGGGGACTCC GCAAAACCTA CGGCGGCACC GTCGTCCTCG ACGACGTCGA CCTCGACGTG
CAGCGCGGCG AAGTGGTCTG CATCCTCGGG TCGAGCGGTT CGGGCAAGAG CACACTGCTG
CGCGCCATGG ACGGTCTGGT CGAGGTCGAC GACGGTTCGG TGGTGGTCAA CGGCGTGACC
ATCGCGGGAT CGGGCGCGGG CCGGCTTACC GCCAAGGACC GGCTGCGCGC GGGCCTGGCG
ATCGTCTTCC AGCAGTTCAA CCTGTTCCAG CACATGACCG TGGCGGCCAA CCTCCGGGAG
GGTCAGGCGC GCGTGCTGGG CCTGACGCGC CGCCACACCA CCGACGTCAA CAACATGCTG
CTGCGCGAGC TGGGTGTCGA GGCCACCGCC GACCGCTATC CCGGGCAGCT CTCCGGTGGG
CAGCAGCAGC GCGTCGCGAT CGCCCGCGCA CTCGCCCTGG CACCGGAGGT CATGCTCTTC
GACGAGCCGA CCTCGGCGCT CGATCCCGAG CGGGTAGGCG ACGTCCTGCG TATCATGCGC
CAACTGGCCG ACCAGGGTAT GACAATGGTG GTCGTCACCC ACGAGATCGC GTTCGCCCGG
CAGTGCGCAT CGCGCGTGGT GTTCGTCGAC GACGGCCGGA TCGTCGAACA GGGCCCGCCG
GAACGCGTCC TCGACGCGCC GAGCAGCGAA CGCACCCAAC GGTTCCTGTC CGCCCTGCTG
CCCGACACCA AACCCCTCAC CCACCGAAAG GTCCTGCAGT GA
 
Protein sequence
MLKEFWHYFT LPELIDGGLL ALRIALLSLI IAWPAGLLLA LISDSRWFLP RLAVGVYIWV 
LRGTPILLQL IFLYNVLPQW GWQLSSETTA VLGLALNAAA FAAEIFRGGL NAVNVSQIDA
ARSIGLSPAL TLLRIRLPQA LRVITPALAS EAIMTVKNTS LASAIAVAEL TLRSQQLVSI
NFEYLPVFGA AAAIYLALNT ILMVVQYLSE RRLDNDRQRH RGPLASWLVA RMHLSAPSAR
GADETPVQLD LHAPEFQTYW DRVRTVAGRD MTEQPTVISV RGLRKTYGGT VVLDDVDLDV
QRGEVVCILG SSGSGKSTLL RAMDGLVEVD DGSVVVNGVT IAGSGAGRLT AKDRLRAGLA
IVFQQFNLFQ HMTVAANLRE GQARVLGLTR RHTTDVNNML LRELGVEATA DRYPGQLSGG
QQQRVAIARA LALAPEVMLF DEPTSALDPE RVGDVLRIMR QLADQGMTMV VVTHEIAFAR
QCASRVVFVD DGRIVEQGPP ERVLDAPSSE RTQRFLSALL PDTKPLTHRK VLQ