Gene Mjls_0260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_0260 
Symbol 
ID4876006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp294429 
End bp295394 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content71% 
IMG OID640137574 
Productperiplasmic binding protein 
Protein accessionYP_001068564 
Protein GI126432873 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.778386 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCAACTG CCTGGTCGCG GCGCAACTTC CTGGCCATGA CCGCCACGCT CGCCGGTTCG 
ACGGTGCTCG CCGGCTGCGG GGGCGACGCG CCCGGCACCG TCGCGAAGGA CGGCTCCGTC
ACCGTCACGC ACGCCTTCGG CGAGACCCGC ATCCCCGGGC CGCCCACCCG CGTCGTCAGC
GCCGGACTCA CCGAACAGGA CGACCTGCTG GCCGTCGAGG TCGTGCCGAT CGCCGTCACC
GACTGGTTCG GCGGTGAGCC GTTCGGCGTA TGGCCATGGG CGCGAGGCCA ACTCGGGCCC
GCTCAGCCGA CGGTGCTCAG CCTCGGCGAC GGTATCCAGA TCGAGGCGAT CCGCGCGCTG
AACCCCGACC TGATCGTCGC CACCAACGCC GGCCTGGACG CCGACACCTA CACGACGCTG
TCGGAGATCG CGCCGACGGT GGCGCAGAGC GGGTCCGCCG CATTCTTCGA GCCGTGGAAG
GACCAGGCCA CGATCATCGG CCAGGCGGTG TTCAAGGCCG ACGAGATGGC GGCGCTGATC
GCCCGCGTCG ACGAGAAATT CACCAACGCG GCCTCGGCCA ATCCACAGTT CGGCGGAAAG
AAGGCGCTGC TGCTGCGCGG CCCGCTCTAC CGCGACAGCG TCCAGGCCGT ACGCCCGGGT
TGGCGCACCG ACTTCCTCAC CCAGATGGGC TTCACCGTCG CCGACCCCGG CGATCCGCTG
ATCCCCCGCG ACCGGATGGC GTCGGTGCTC GACGCCGCCG ACGTCCTCAT CTGGACGACC
GAGAGCGAAC AGGAACAGGG CGCGCTGCTC GCCGATCCGA CCATCGCGGG TCTGAAAGCC
GTCGCGGGTG GGCGCACCAT CTTCACCGAC AAGGAACTCG CCGGGGCGAT CGCGTTCGCC
TCCCCGCTGT CCTATCCGCT GGTCGCCGAC CGGCTGCCGC CGCTGCTCGC GCAGATCCTG
GCCTGA
 
Protein sequence
MSTAWSRRNF LAMTATLAGS TVLAGCGGDA PGTVAKDGSV TVTHAFGETR IPGPPTRVVS 
AGLTEQDDLL AVEVVPIAVT DWFGGEPFGV WPWARGQLGP AQPTVLSLGD GIQIEAIRAL
NPDLIVATNA GLDADTYTTL SEIAPTVAQS GSAAFFEPWK DQATIIGQAV FKADEMAALI
ARVDEKFTNA ASANPQFGGK KALLLRGPLY RDSVQAVRPG WRTDFLTQMG FTVADPGDPL
IPRDRMASVL DAADVLIWTT ESEQEQGALL ADPTIAGLKA VAGGRTIFTD KELAGAIAFA
SPLSYPLVAD RLPPLLAQIL A