| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_0179 |
|---|
| Symbol | |
|---|
| ID | 4875925 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | - |
|---|
| Start bp | 192817 |
|---|
| End bp | 193596 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640137493 |
|---|
| Product | short chain dehydrogenase |
|---|
| Protein accession | YP_001068483 |
|---|
| Protein GI | 126432792 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.521326 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCACCT CACTGCAGGG CCGCTCCGCG ATCGTCACCG GAGGTAGCAA GGGCATCGGC
CGGGGAATCG CCGAGGTCTT CGCCAATGCC GGCGTCGACG TCGTGGTGAC CGGACGCAAT
CAGGCCGACA TCGACGCGAC GGTCGCCGAT CTGGGCGGGA AGGCCGGCAA GGTCAGCGGG
CTGGCCGCCG ATGTGGCGGA TCCGGCCGAC TGCCGCCGCG TGGTCGACAC CGCCGTCGAA
CGCCACGGTG GGCTCGACAT CGTCTGCGCC AACGCCGGGA TCTTCCCGTC CGGACGGCTC
GAGGAACTCA CCCCTGAGGA CATCGAGCAG GTCCTCTCGG TCAACTTCAA GGGCACCGTG
TACATCGTGC AGGCCGCGCT CTCTGCGCTG GCGGCCAGCG GACACGGCCG CGTCATCGTC
ACCTCCTCGA TCACCGGACC CGTCACGGGA TATCCCGGCT GGTCGCACTA CGGGGCGAGC
AAGTCCGCGC AGCTCGGTTT CATCCGCACC GCGGCAATGG AGCTGGCGCC CAAGCGGATC
ACCATCAACG CGGTGCTGCC CGGCAACATC ATCACCGAGG GCCTGGTCGA CATGGGCGAG
GACTACATGA ACCAGATGGC CGCGGCGATC CCCGCCGGGC GGCTGGGCAG CGTCGCCGAC
ATCGGCAACG CCGCGCTGTT CTTCGCCACC GAGGAGGCCG GTTACATCAC CGGCCAGAGC
CTCATCGTCG ACGGCGGGCA GATCCTGCCC GAGTCGCATC AGGCGATCGC CGAGTTGTAA
|
|---|
| Protein sequence | MFTSLQGRSA IVTGGSKGIG RGIAEVFANA GVDVVVTGRN QADIDATVAD LGGKAGKVSG
LAADVADPAD CRRVVDTAVE RHGGLDIVCA NAGIFPSGRL EELTPEDIEQ VLSVNFKGTV
YIVQAALSAL AASGHGRVIV TSSITGPVTG YPGWSHYGAS KSAQLGFIRT AAMELAPKRI
TINAVLPGNI ITEGLVDMGE DYMNQMAAAI PAGRLGSVAD IGNAALFFAT EEAGYITGQS
LIVDGGQILP ESHQAIAEL
|
|---|
| |