| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_3221 |
|---|
| Symbol | |
|---|
| ID | 3922274 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | - |
|---|
| Start bp | 3523711 |
|---|
| End bp | 3525057 |
|---|
| Gene Length | 1347 bp |
|---|
| Protein Length | 448 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637898836 |
|---|
| Product | deoxyribodipyrimidine photolyase |
|---|
| Protein accession | YP_504622 |
|---|
| Protein GI | 88604444 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0415] Deoxyribodipyrimidine photolyase |
|---|
| TIGRFAM ID | [TIGR00591] photolyase PhrII |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.147791 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCAGC CTGAACGCAT TACTTCATTC AATAATCAGG AACCGAAGGG TTCGTACATC
CTCTACTGGA TGCAATCCGC AGTCAGGACC AGGTATAACC ATGCCCTTGA ATATGCGATC
GAAAGATCGA ACGAACTGAA AAAACCTCTC ATCGTCGTCT TCTGTCTTGA CCACTCCTAT
CCTGAGGCAA CACCAGTTCA TTACCGGTTT TTATGGGAGG GTCTTCAGGA TGTGAATCGT
TCTCTTACCG AGCGGGGAAT CGGATTTCAA ATCCTCTCCG GGAGTCCGGT TGATATCATT
CCCCGGATTG CAGACGATGC ATGCATGATG GTGACCGATC AGGGCTGGAC CCGTCTTCAG
CGGGAGTGGA GGCAAAAAGT CATTGATACC GCTCCCTGTA AGGTAGTAAT TGTCGAGACC
AACCTGATTG TACCGGTTCA TGTTGCTTCA CCAAAGGAAG AATGGTCGGC AGGAACATTC
AGACCAAAGA TTACCCGGCA ACTTCCTGCC TTTCTGCACC CCCTCATCTG TCGGCATGTG
CAGGGAGAAT CGACGGACTG TGAACCATTC ACAGGGCTCC CAGTCGGAGC AGAGCAGCAG
TTTACAGGGA AACCTCTCCC AGAGGATACT TCTACTCAGT TCCTTCCCGG AGGAGAGAAT
GCTGCAGACC ATTATCTCTC TGCATTTCTC TCCGAGACCA TCGACCGGTA CGAGGCCACT
CATAATGATC CGACAGCCCA TGCAACATCA TATTTGAGCG CATACTTGCA TTTCGGTCAT
ATATCGCCGC TTGATATCGC CCTCCGGGTG ATGGAACATC CCGGACCGGG AACAAATGCG
TTTCTGGAAC AACTCATCGT TCGTCGGGAG TTATCACACA ATTTTGTCTG GTATAACCCC
TTATATGACC ACTATGAAGG CCTCCCGGAG TGGACAAGGA AGTCGCTTGA GAAGCATCGA
ATTGATACAC GGGAATATTC ATACACGCCG GCAGATTTTG AAGAGTGCAG GACTCACGAT
AGAGCATGGA ATGCAATGCA ACTCTCGATG ATTCGAACCG GGTACCTGCA TGGATACCTG
CGGATGTACT GGGGAAAGAA GATCCTTGAA TGGACTGAAA CACCTGAAGA TGCATATGCT
ATTGCGCTTT ATCTCAATAA CCGGTATGAA CTGGACGGGC GTGACCCGAA CGGATACTGC
GGGGTTGCCT GGTGTTTTGG CAAACATGAC CGACCATGGA AGGAGCGGCC GGTATTTGGA
ACCATCCGGT ATATGAATGA GGCCGGACTC CGGCGGAAGT TCAGGCTGGA TGGATGGGTA
GATAGGACGC TCGATCTGTA CTCATGA
|
|---|
| Protein sequence | MIQPERITSF NNQEPKGSYI LYWMQSAVRT RYNHALEYAI ERSNELKKPL IVVFCLDHSY
PEATPVHYRF LWEGLQDVNR SLTERGIGFQ ILSGSPVDII PRIADDACMM VTDQGWTRLQ
REWRQKVIDT APCKVVIVET NLIVPVHVAS PKEEWSAGTF RPKITRQLPA FLHPLICRHV
QGESTDCEPF TGLPVGAEQQ FTGKPLPEDT STQFLPGGEN AADHYLSAFL SETIDRYEAT
HNDPTAHATS YLSAYLHFGH ISPLDIALRV MEHPGPGTNA FLEQLIVRRE LSHNFVWYNP
LYDHYEGLPE WTRKSLEKHR IDTREYSYTP ADFEECRTHD RAWNAMQLSM IRTGYLHGYL
RMYWGKKILE WTETPEDAYA IALYLNNRYE LDGRDPNGYC GVAWCFGKHD RPWKERPVFG
TIRYMNEAGL RRKFRLDGWV DRTLDLYS
|
|---|
| |