Gene Mhun_3093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_3093 
Symbol 
ID3921970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp3368737 
End bp3369912 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content46% 
IMG OID637898703 
ProductDegT/DnrJ/EryC1/StrS aminotransferase 
Protein accessionYP_504499 
Protein GI88604321 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 
TIGRFAM ID[TIGR03588] UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.354679 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAATA TGACCTATCC CCTTCCATAC GGCAGGCAAT GGATCGATGA CGACGATATT 
ACCGCTGTTA TCGCTGCTTT AAAAGGAGAC TGGCTCACCC AGGGCCCCTT GGTTGAGAGC
TTTGAACAGA AGATTGCGGA ATATGTCGGA TCAGAATATG CCGTTGCATT TAATTCCGGG
ACCTCTGCTC TCCATGGAGC ATATTACGCA GCCGGGGTCC GAACCGGAGA TGAAGTAATT
ACCAGTCCCA TCACCTTTGT TGCAACCGCA AACGCCGGAG TATACCTGGG TGCCCGTCCG
GTGTTTGTAG ACATTGATAA GAAGACATGG TGTATTGACA CCGATAAAAT CAATGAAGCA
ATATCCAACC GGACGAAGGT TATTGCTCCG GTGGATTTTG CCGGATATCC GGTTGATATG
ACATCCATTC GGGAGATAGC ACAAGACCAT TCTTGCATAG TGGTGGAAGA TGCAGCCCAT
GCTCTTGGGG CAATCCGGGG TGATGTGAAA GTTGGTACTG AAGCAGATAT GACGATGTTC
AGTTTCCATC CGGTCAAACA TATCACTACC GGAGAAGGGG GTATTGTTAC TACAAATAAC
CGGGAATTCG CCGCGGCGAT GAAACGATTC CGAAGCCACG GGATAACAAA AGATCCAGAA
TTACTTCACA AAAATGAGGG CCAATGGTAC TACGAAATGC AAGACCTAGG ATATAATTAC
CGGATAACTG ACATTCAGTG TGCTCTCGGG CTCTCACAAC TTGAAAAACT TGAGAGATTT
GTTAAGCGCC GGAATGAGAT CGCCCGGATG TATGATGAAG CATTCCGGGG GAATGAAAAA
CTGGTGAACC CTCCAAAACC TCCCCAAAAT TCCCGCCATG CCTATCATCT CTATCCGGTC
TGTTTCACAG GAGTTGATAG GAAAAAGATC TTCATGGACC TTCGGGAAAT AGGGATCTTC
TGCCAGGTCC ATTATATTCC GGTCCATCTC CAACCATATT ACCGTGAGAG ATTTGGATAT
CACGATGGAG ATTTTCCAGT TGCAGAGAAT TTTTACCAAA GTGAAATATC CCTGCCGATG
TTTCCGGCGA TGAGTGATGA GGATGTAGAA CGGGTTATTG TTGGAGTGCA GGAGATGTTT
GAAAAAAGAG TATATGCTGA CTTAAAACTT GTTTAA
 
Protein sequence
MQNMTYPLPY GRQWIDDDDI TAVIAALKGD WLTQGPLVES FEQKIAEYVG SEYAVAFNSG 
TSALHGAYYA AGVRTGDEVI TSPITFVATA NAGVYLGARP VFVDIDKKTW CIDTDKINEA
ISNRTKVIAP VDFAGYPVDM TSIREIAQDH SCIVVEDAAH ALGAIRGDVK VGTEADMTMF
SFHPVKHITT GEGGIVTTNN REFAAAMKRF RSHGITKDPE LLHKNEGQWY YEMQDLGYNY
RITDIQCALG LSQLEKLERF VKRRNEIARM YDEAFRGNEK LVNPPKPPQN SRHAYHLYPV
CFTGVDRKKI FMDLREIGIF CQVHYIPVHL QPYYRERFGY HDGDFPVAEN FYQSEISLPM
FPAMSDEDVE RVIVGVQEMF EKRVYADLKL V