Gene Mhun_3078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_3078 
Symbol 
ID3922336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp3351962 
End bp3353242 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content43% 
IMG OID637898688 
ProductUDP-glucose 6-dehydrogenase 
Protein accessionYP_504484 
Protein GI88604306 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1004] Predicted UDP-glucose 6-dehydrogenase 
TIGRFAM ID[TIGR03026] nucleotide sugar dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.455066 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.236804 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTTGC ATATTTCAAT TATCGGGGGG GGGTATGTAG GCCTTGTTAC CGGTGCCTGT 
TTTGCTCAAC TCGGTAATAA GGTAACCATT ATTGAAATAG ATCAGAGAAA GATCGATTCA
ATAAACAAGG GGATTCCCCC CATCTATGAA GAAGGACTGG AAGAGATACT AAAAAAGAAT
TCGGGAACCC GATTATTTGC TACCAATTCT TATGCTTCCG TTGCAGAAAG TGATGTTTCA
ATTATCTGCG TTGGAACGCC GCCGAATCCT GACGGTTCTT CTAACCTTGA ATATATCAGA
TCTGCAGCAA CATCCATTGG AGAGGCTCTG AAAGATAATA CCAGGTACCA TGTGATAACG
GTAAAGAGCA CGGTTCCTCC GGGAACTACT GAAAAGATTG TTCTTCCTGA AGTCCGGAGG
AATTCCGGGA GAGATTCTGA TACCCTTGGT TTTTGTATGA ACCCTGAGTT TTTACGTGAG
GGAAGAGCGA TTGAGGATTT TTTACACCCT GACCGGATAG TCATTGGCTC ATCTGATGAA
CAGGCCGAAG AGGTTCTGAA GAACCTCTAT TCAACTCTGA ATGCCCCCAT TATCTCTACA
TCGCTCACTG CTGCCGAGAT GATAAAATAT ACCGCAAACT CATTTTTAGC AACAAAAATT
TCATTCTCCA ATGAAATCGG GAATATTTGT AAAAAACTCG GAATAGATGT GTATGATGTG
ATGAAGGGGG CCGGGCTTGA TCACCGTATC GGATCGCATT TCCTCAATGC AGGTGCAGGG
TTTGGAGGCA GCTGTTTTCC CAAAGACGTA TCAGCACTTA TCAGTCTTGC AGAGAGTGTA
GGGGAAAGAC CTCAATTGCT GCATGCCGTT ATTGAAATCA ATGAGAAACA GCCACATAAA
ATGCTGGAAC TTGTCCGTAA ACGAATCGGG GATCTGAAAG GTAAACGAAT TGCAGTCCTC
GGACTTGCGT TCAAGGATAA TACTGATGAT ATCCGTGATT CGAGATCAAT CCCGGTTATT
GAGGAACTTA TCAAAGAAGG AGCGGATGTC ATTGCATATG ATCCTATGGC AATGATCAAT
ATGAAGCGGC TATTCCCATC AATTACCTAT GCAAAGAGTA TTAAAGATGT CCTAAAAGAT
GCGGACGGAT GTTTGATAAT GACTGAATGG CCGGAGTTTT CACATTTGTC TGAAGAGTTC
TCTCTCATGA AGCAGCCTCC GGTAATCCTT GAAGGACGGC GGATTATAAA ACGACCGGAG
GTTGAGGGAA TTTGCTGGTA A
 
Protein sequence
MSLHISIIGG GYVGLVTGAC FAQLGNKVTI IEIDQRKIDS INKGIPPIYE EGLEEILKKN 
SGTRLFATNS YASVAESDVS IICVGTPPNP DGSSNLEYIR SAATSIGEAL KDNTRYHVIT
VKSTVPPGTT EKIVLPEVRR NSGRDSDTLG FCMNPEFLRE GRAIEDFLHP DRIVIGSSDE
QAEEVLKNLY STLNAPIIST SLTAAEMIKY TANSFLATKI SFSNEIGNIC KKLGIDVYDV
MKGAGLDHRI GSHFLNAGAG FGGSCFPKDV SALISLAESV GERPQLLHAV IEINEKQPHK
MLELVRKRIG DLKGKRIAVL GLAFKDNTDD IRDSRSIPVI EELIKEGADV IAYDPMAMIN
MKRLFPSITY AKSIKDVLKD ADGCLIMTEW PEFSHLSEEF SLMKQPPVIL EGRRIIKRPE
VEGICW