| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_2796 |
|---|
| Symbol | |
|---|
| ID | 3923034 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | - |
|---|
| Start bp | 3068986 |
|---|
| End bp | 3069513 |
|---|
| Gene Length | 528 bp |
|---|
| Protein Length | 175 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 637898407 |
|---|
| Product | metal dependent phosphohydrolase |
|---|
| Protein accession | YP_504209 |
|---|
| Protein GI | 88604031 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1418] Predicted HD superfamily hydrolase |
|---|
| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG
[TIGR00295] conserved hypothetical protein TIGR00295 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0988544 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGTAGTC CGGGAGACGA ATATTTATCT TTTCTTAACG AGGCCGGGTG TGATCCCGGA
GTCATTGAGC ATTGCCGTGT TGTTCGTGAT GTTGCTGTCC GGATTGCATC TGACATTACC
GGTGCAGGAA GAATAGTAGA CACGCAATTA GTTGCTGCAG GAGCGATCCT TCATGACATC
GGCCGGTCCA GGACTCATGG GATGGGCCAT GCTGATGAAG GAGGGATTAT CTGCCGGTCA
CTTGGGTTTG ATGAGCCTCT CTGCCGAATT GTTGAGCGGC ATATCGGGGC CGGTCTTCAG
GCTGACGAAC GGGCAGGGTT CGGGCTTTCT GCTGTTGATC GGATTCCTGA AACGCTGGAG
GAGAAGATTG TGGCTCATGC TGATAACCTC GTGAAAGGAA CCCGGGTGAT AAGCGATGAA
GAGTTTAAAT CATCGTTGGA ACGGTTTGAT GAGCCGATCA GGGAACGGTT TCTTGCACTG
GCGAATGAAC TGGAGCGGCT GAAAACGCCT GATCCAGAAT CTTCATAG
|
|---|
| Protein sequence | MCSPGDEYLS FLNEAGCDPG VIEHCRVVRD VAVRIASDIT GAGRIVDTQL VAAGAILHDI
GRSRTHGMGH ADEGGIICRS LGFDEPLCRI VERHIGAGLQ ADERAGFGLS AVDRIPETLE
EKIVAHADNL VKGTRVISDE EFKSSLERFD EPIRERFLAL ANELERLKTP DPESS
|
|---|
| |