| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_2590 |
|---|
| Symbol | |
|---|
| ID | 3923207 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | + |
|---|
| Start bp | 2862230 |
|---|
| End bp | 2863459 |
|---|
| Gene Length | 1230 bp |
|---|
| Protein Length | 409 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637898201 |
|---|
| Product | NADH dehydrogenase (ubiquinone) |
|---|
| Protein accession | YP_504006 |
|---|
| Protein GI | 88603828 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3261] Ni,Fe-hydrogenase III large subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCAGA AAAAAGCACC CTATGAACTT CCCATCGGGC CTATACACCC GGCATTAAAA
GAACCAATAA ATTTCACCTT TCAGATGAAT GGGGAGGTTA TTGAAAAGGT TGACTTTGCA
CCCGGACGGG CACACCGGGG GATTGAATGG ATGGGGATGC GGAGAAACCC GGTTCAAATC
CTGCATCTCT GTGACCGGAT ATGCGGTATT TGTGGAGTTC ACCATGCACT TGTCTTTGCA
CAGGCGGTTG AGCAGATCGC AGATATTGAG GTTCCTGACC GGGCATATTA TGTCCGGACC
ATTATTGCAG AATTTGAGCG GATACAGTCT CACATCCTCT GGGCAGGAGT CGCAGCCCAT
GAACTCGGAT TTGATACCCT CTTCTACCTT GCCTGGCAGA TACGGGAAGA GTCAGTCGAT
GTGATTGAGT ATATAACCGG GAACCGGGTC AATTACGGCA TCATGATGCT TGGCGGAACC
CGCCGGGACA TTACCGCAGA TATGTTCCCC CGTCTGGAAC AGGCACTCCA GTACTATGAA
GGACTCCTTG AAAAGATGGT CAATCTCTTC CTCAACGACA AGACCATTGC CATGCGGTGC
AAAGATACCG GAATCCTGAC AAAACGCCGG GCATTGGAGC TTGCAACCGT GGGACCCACC
TCACGGGCAT CAGGACTTGC CATGGATGTC AGGATTGATT CTCCCTATGC AGCATATGGC
GACCTTGATT TTGACATCGT GCTTCCTGAT GTGTATAACA GCGAAGGTAA CGGGGATGTC
TATGACCGGA TCATCGTCCG TATCTTTGAG ATAAAACAGT CGATTGACAT CATCAGACAA
TGCATGAAAC AGATGCCTGA AGGTCCAGTT CTTGCTGAAG AGAAGTATGC AAAGTTGCTC
ATGAATCTGA AGAAGGCATC CGGCGAGGCA TTTGCCAGGG TTGAAGCTCC CCGTGGTGAA
GATATGCACT ATGTCAGGAT GAATGGAAAG CAGGAAGCTC CCGAGATGTG GAAGGTCAAG
GCATCCACCT ACTCAAACCA GATGGCATGG GTGGAGATAC TTCAGGGAGA ACAGATTGCT
GACATCCCGA TCATTGTTGC ATCCATCGAT CCCTGCATGT CATGCACCGA CCGGGTGGCT
GTTGTCGGGC AGGATGGGAA TGCCGGTATC ATGACAAAAG AGCATCTCCA CCGATTGTCT
GTTGAGAAGA CACGGAGGCT TCAGTCATGA
|
|---|
| Protein sequence | MSQKKAPYEL PIGPIHPALK EPINFTFQMN GEVIEKVDFA PGRAHRGIEW MGMRRNPVQI
LHLCDRICGI CGVHHALVFA QAVEQIADIE VPDRAYYVRT IIAEFERIQS HILWAGVAAH
ELGFDTLFYL AWQIREESVD VIEYITGNRV NYGIMMLGGT RRDITADMFP RLEQALQYYE
GLLEKMVNLF LNDKTIAMRC KDTGILTKRR ALELATVGPT SRASGLAMDV RIDSPYAAYG
DLDFDIVLPD VYNSEGNGDV YDRIIVRIFE IKQSIDIIRQ CMKQMPEGPV LAEEKYAKLL
MNLKKASGEA FARVEAPRGE DMHYVRMNGK QEAPEMWKVK ASTYSNQMAW VEILQGEQIA
DIPIIVASID PCMSCTDRVA VVGQDGNAGI MTKEHLHRLS VEKTRRLQS
|
|---|
| |